Publications

Peer-reviewed publications by SoMAS Faculty

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Hall, A., Rahimi, S., Norris, J., Ban, N., Siler, N., Leung, L. R., … Reed, K. A., … & Qian, Y. (2024). An evaluation of dynamical downscaling methods used to project regional climate change. Journal of Geophysical Research: Atmospheres, 129(24), e2023JD040591.

Shipley, O. N., Nicoll, A., Cerrato, R. M., Dunton, K. J., Peterson, B. J., Sclafani, M., … & Frisk, M. G. (2024). Performance of a fine-scale acoustic positioning system for monitoring temperate fish behavior in relation to offshore marine developments. Animal Biotelemetry, 12(1), 1-14.

McGuire, B. T., Sanderson, M. P., Smith, J. L., & Gobler, C. J. (2024). Clearance rates and toxin accumulation by North Atlantic bivalves during harmful algal blooms caused by the dinoflagellate, Dinophysis acuminata, in NY, USA, estuaries. Harmful Algae, 102745.

Ayoub, A., Caruso, F., Segre, P., Hickmott, L., Warren, J. D., Chiang, G., … & Bocconcelli, A. (2024). Feeding behavior of blue whales (Balaenoptera musculus) during austral summer in northern Chilean Patagonia. Ethology Ecology & Evolution, 1-17.

Cerrato, R. M., Flood, R. D., Bopp, J., & Bokuniewicz, H. J. (2024). Extent of Benthic Habitat Disturbance by Offshore Infrastructure. Journal of Marine Science and Engineering, 12(12), 2142.

Cochran, J. K., Wei, Z., Horowitz, E., Fitzgerald, P., Heilbrun, C., Stephens, M., … & Charette, M. (2024). 210Po and 210Pb distributions along the GEOTRACES Pacific Meridional Transect (GP15): Tracers of scavenging and particulate organic carbon (POC) export. Global Biogeochemical Cycles, 38(11), e2024GB008243.

Chang, H. Y., Richards, R. A., Townsend, D. W., & Chen, Y. (2024). Temperature and Abundance Effects on Spatial Structures of Northern Shrimp (Pandalus borealis) at Different Life Stages in the Oceanographically Variable Gulf of Maine. Fisheries Oceanography, e12714.

Khan, A. S., Aurand, A., Hamideh, S., Vickery, J., Walter, R. J., & Errett, N. A. (2024). Opportunities for Implementation of Disaster Risk Management Strategies among Public Housing Authorities. Journal of Planning Education and Research, 0739456X241293384.

Gilbert, C., Li, R., Colle, B., Moses, J., & Golden, S. (2024). Investigating the role of community organizations in communicating extreme weather events in New York City: A content analysis. Risk Analysis.

Zhu, Z., Yang, F., Kollias, P., Lamer, K., Luke, E., Mead, J. B., … & McComiskey, A. (2024). Peering into Cloud Physics Using Ultra-Fine-Resolution Radar and Lidar Systems. Bulletin of the American Meteorological Society, 105(11), E2010-E2025.

Michaud, E., Aschenbroich, A., Stieglitz, T., Brunier, G., Aller, R. C., Anthony, E., … & Thouzeau, G. (2024). Upscaling the contribution of crab burrows to mangrove ecosystem functioning in French Guiana (South America). Regional Environmental Change, 24(4), 1-14.

Bower, E., Reed, K. A., Alaka Jr, G. J., & Hazelton, A. T. (2024). Verification of Operational Forecast Models in Cases of Extratropical Transition of North Atlantic Hurricanes. Weather and Forecasting, 39(11), 1695-1714.

Wu, H., Flynn, C., Hall, C., Che-Castaldo, C., Samaras, D., Schwaller, M., & Lynch, H. J. (2024). Penguin colony georegistration using camera pose estimation and phototourism. Plos one, 19(10), e0311038.

Puigdomènech Treserras, B., & Kollias, P. (2024). An improved geolocation methodology for spaceborne radar and lidar systems. Atmospheric Measurement Techniques, 17(21), 6301-6314.

Wei, D., Millet, D. B., Shepson, P. B., & Steiner, A. L. (2024). Vertical variations in biogenic organic nitrates at two temperate forest sites. ACS EST Air. doi:10.1021/acsestair.4c00123

Li, Y., Yin, J., Sun, M., Kleisner, K., Litsinger, E., Jud, S., … & Chen, Y. (2024). Examining the discrepancy and synergy between marine protected areas and fisheries management in the Bohai Sea, China. Ocean & Coastal Management, 258, 107409.

Chang, H. Y., & Chen, Y. (2024). Shifting spawning phenology in Hudson River American Shad. Marine and Coastal Fisheries, 16(5), e10312.

Geller, M. A., & Wang, L. (2024). The “Notch” in Unstable Layers and the Stability Minimum in the Tropics. Journal of Climate.

Safina, C. (2024). Fish farming and beyond: Moral reckoning required. Science Advances, 10(42), eadt5436.

Chang, E. K. M. (2024). Comment on “anticyclonic suppression of the North Pacific transient eddy activity in midwinter” by Okajima et al. Geophysical Research Letters, 51, e2024GL110011. https://doi.org/10.1029/2024GL110011

Chen, S., Wang, M., Wu, M., Lu, Y., Fu, A., Gobler, C. J., … & Mao, X. (2024). Greenhouse Gas Emission and Denitrification Kinetics of Woodchip Bioreactors Treating Onsite Wastewater. Water Research, 122562.

Su, S., Zhao, C., Chen, Y., & Tang, Y. (2024). Unlocking sustainability in China’s small-scale fisheries: A case study of livelihood analysis in the Bohai Region. Ocean & Coastal Management, 258, 107405.

Ladds, M., Sosik, H. M., & Gobler, C. J. (2024). Prey morphotype and abundance controls plastid retention and bloom dynamics for a mixotrophic dinoflagellate. Limnology and Oceanography.

Kosiba, K. A., Lyza, A. W., Trapp, R. J., Rasmussen, E. N., Parker, M., Biggerstaff, M. I., … French, M.M., … Kollias, P. & Turner, D. D. (2024). The propagation, evolution, and rotation in linear storms (PERiLS) project. Bulletin of the American Meteorological Society, 105(10), E1768-E1799.

Gross, C. P., Duffy, J. E., Hovel, K. A., Reynolds, P. L., Boström, C., Boyer, K. E., … Peterson, B. J., … & Stachowicz, J. J. (2024). A Latitudinal Cline in the Taxonomic Structure of Eelgrass Epifaunal Communities is Associated With Plant Genetic Diversity. Global Ecology and Biogeography, e13918.

Grouzdev, D., Pales Espinosa, E., Tettelbach, S., Farhat, S., Tanguy, A., Boutet, I., … & Allam, B. (2024). Chromosome-level genome assembly of the bay scallop Argopecten irradians. Scientific Data, 11(1), 1057.

Brianik, C. J., Espinosa, E. P., Liu, M., Topping, P., Rivara, G., Guo, X., … & Allam, B. (2024). Triploid eastern oysters (Crassostrea virginica) display high susceptibility to microbial infections but only during early ontogenetic stages. Aquaculture, 741613.

Conners, M. G., Green, J. A., Phillips, R. A., Orben, R. A., Cui, C., Djurić, P. M., … & Thorne, L. H. (2024). Dynamic soaring decouples dynamic body acceleration and energetics in albatrosses. Journal of Experimental Biology, 227(18).

Henkes, G. A., Place, P. F., & Mak, J. E. (2024). Large, negative atmospheric carbon monoxide clumped isotope values result from kinetic isotope fractionation, tracing OH• reactivity. AGU Advances, 5(5), e2023AV000922.

Roberts, C., Béné, C., Bennett, N., Boon, J. S., Cheung, W. W., Cury, P., … Pikitch, E.P., … & O’leary, B. C. (2024). Rethinking sustainability of marine fisheries for a fast-changing planet. npj Ocean Sustainability, 3(1), 41.

Ladds, M., Smith, J., Strohm, V., & Gobler, C. J. (2024). Acartia tonsa grazing on the harmful dinoflagellate Dinophysis acuminata reduces copepod survival and increases extracellular toxin concentrations. Marine Ecology Progress Series, 745, 25-40.

Chang, Kar, “Data for GRL paper “Using the Curvature of the Local Wind to Separate Energetics Contributions from Cyclones and Anticyclones is not Physically Meaningful”” (2024). SoMAS Research Data. 21. https://commons.library.stonybrook.edu/somasdata/21

Carman, N. A., Hausrath, E. M., Celestian, A., Chavez, J., Hermis, N., LaRowe, D. E., … Price, R.E., & Barge, L. M. (2024). Fe/Mg-Silicate Chemical Gardens as Analogs to Silicate-Rich Hydrothermal Chimneys on Early Earth and Mars. ACS Earth and Space Chemistry.

Şen, B., Che‐Castaldo, C., Lynch, H. J., Ventura, F., LaRue, M. A., & Jenouvrier, S. (2024). Detecting stochasticity in population time series using a non‐parametric test of intrinsic predictability. Methods in Ecology and Evolution.

Gobler, C. J., Drinkwater, R., Anthony, A., Goleski, J., Famularo, A. M., Wallace, M., … & Hem, R. Sewage-and fertilizer-derived nutrients alter the intensity, diversity, and toxicity of harmful cyanobacterial blooms in eutrophic lakes. Frontiers in Microbiology, 15, 1464686.

Grouzdev, D., Farhat, S., Guo, X., Espinosa, E. P., Reece, K., McDowell, J., … & Allam, B. (2024). Development and validation of a 66K SNP array for the hard clam (Mercenaria mercenaria). BMC genomics, 25(1), 847.

Twiss KC, Bogaard A, Haddow S, Milella M, Taylor JS, Veropoulidou R, Kay K, Knüsel CJ, Tsoraki C, Vasić M, Pearson J, Busacca G, Mazzucato C, Pochron S. (2024) “But some were more equal than others:” Exploring inequality at Neolithic Çatalhöyük. PLoS ONE 19(9): e0307067. https://doi.org/10.1371/journal.pone.0307067

Yanchilina, A. G., L. E. Rodriguez, R. Price, L. M. Barge, and P. Sobron (2024), Sensing remote realms of the deep ocean on Earth—and beyond, Eos, 105, https://doi.org/10.1029/2024EO240375.

Smolinski, R., Clyde, P., Asato, C., Brownawell, B., Gobler, C., & McDonough, C. (2024). Removal of Organic Contaminants in On-Site Wastewater Treatment Systems: The Role of Sorption and Transformation. ACS ES&T Water.

Wing, A. A., Silvers, L. G., & Reed, K. A. (2024). RCEMIP-II: mock-Walker simulations as phase II of the radiative–convective equilibrium model intercomparison project. Geoscientific Model Development, 17(16), 6195-6225.

Zhang, Y., Goethel, D. R., Smith, M. W., Picariello, L., Chen, Y., Li, Y., … & Agar, J. (2024). A web-based decision support tool for performing management strategy evaluation on the Gulf of Mexico red snapper resource. Ecological Informatics, 102756.

Lowell, A., Hill, C. E., Dupont, S., Infantes, E., Ramesh, K., Peterson, B., … & Cox, T. E. (2024). Low pH enhances germination of eelgrass (Zostera marina L.) seeds despite ubiquitous presence of Phytophthora gemini. Aquatic Botany, 103805.

Wakefield, E. D., McClymont, E. L., Carneiro, A. P., Croxall, J. P., González-Solís, J., Granroth-Wilding, H. M., Thorne, L. H. … & Phillips, R. A. (2024). Seasonal resource tracking and use of sea-ice foraging habitats by albatrosses and large petrels. Progress in Oceanography, 103334.

Steinke, J., Gilbert, C., Coletti, A., Levin, S. H., Suk, J., & Oeldorf-Hirsch, A. (2024). Women in STEM on TikTok: Advancing Visibility and Voice Through STEM Identity Expression. Social Media+ Society, 10(3), 20563051241274675.

Aubrecht, K. B. (2024). What We Can Learn from Environmental Educators about Teaching for Climate Action. Journal of Chemical Education.

Oue, M., Lamer, K., Luke, E. P., Xu, Z., Yang, F., Zhu, Z., & Kollias, P. (2024). Training the next generation of researchers in exploring cloud dynamics and microphysics using millimeter-wavelength radars. Bulletin of the American Meteorological Society, 105(8), E1514-E1520.

Dolan, T. E., Feldheim, K. A., O’Leary, S. J., Fede, C. M., McElroy, A. E., & Frisk, M. G. Patterns of persistence: Genetic and behavioral population complexity of winter flounder amid population declines. Journal of Fish Biology.

Wang, M., Zeng, F., Chen, S., Wehrmann, L. M., Waugh, S., Brownawell, B. J., Gobler, C.J., & Mao, X. (2024). Phosphorus attenuation and mobilization in sand filters treating onsite wastewater. Chemosphere, 143042.

Kaczvinsky, C., Levy, H., Preston, S., Youngflesh, C., Clucas, G., Lynch, H. J., … & Smith, A. L. (2024). The influence of biotic and abiotic factors on the bacterial microbiome of gentoo penguins (Pygoscelis papua) in their natural environment. Scientific Reports, 14(1), 17933.

Aller, R., Klingensmith, I., Stieglitz, T., Heilbrun, C., Waugh, S., Aschenbroich, A., … & Michaud, E. (2024). Biogeochemical plumbing of pioneer mangrove intertidal flats in French Guiana. Regional Environmental Change, 24(3), 117.

Wei, D., Cao, C., Karambelas, A., Mak, J., Reinmann, A., & Commane, R. (2023). High-resolution modeling of summertime biogenic isoprene emissions in New York City. Environmental Science & Technology.

Wang, W. L., van de Lindt, J. W., Sutley, E., & Hamideh, S. (2024). Interdependent Recovery Methodology for Residential Buildings and Household Housing in Community Resilience Modeling. ASCE OPEN: Multidisciplinary Journal of Civil Engineering, 2(1), 04024007.

Strohm, V. R., Ayache, N., Millette, N. C., Menegay, A., Gobler, C. J., Campbell, L., & Smith, J. L. (2024). Role of Turbulence in Dinophysis spp. Growth, Feeding, and Toxin Leakage in Culture. Harmful Algae, 102666.

Lee, C. S., Shipley, O. N., Ye, X., Fisher, N. S., Gallagher, A. J., Frisk, M. G., … & Venkatesan, A. K. (2024). Accumulation of Per-and Polyfluoroalkyl Substances (PFAS) in Coastal Sharks from Contrasting Marine Environments: The New York Bight and The Bahamas. Environmental Science & Technology.

Ansmann, A., Jimenez, C., Knopf, D. A., Roschke, J., Bühl, J., Ohneiser, K., & Engelmann, R. (2024). Impact of wildfire smoke on Arctic cirrus formation, part 2: simulation of MOSAiC 2019− 2020 cases. EGUsphere, 2024, 1-29.

Leone, M. T., & Warren, J. D. (2024). Acoustic monitoring of artificial reefs reveals Atlantic cod and weakfish spawning and presence of individual bottlenose dolphins. The Journal of the Acoustical Society of America, 156(1), 137-150.

Fritts, D. C., Wang, L., Lund, T., & Geller, M. A. (2024). Kelvin Helmholtz Instability “Tube” and “Knot” Dynamics, Part III: Extension of Elevated Turbulence and Energy Dissipation into Increasingly Viscous Flows. Journal of the Atmospheric Sciences.

Roohi, M., Ghasemi, S., Sediek, O., Jeon, H., van de Lindt, J. W., Shields, M., Hamideh, S., & Cutler, H. (2024). Multi-disciplinary seismic resilience modeling for developing mitigation policies and recovery planning. Resilient Cities and Structures, 3(2), 66-84.

Iuchi, K., & Finn, D. (2024). Recovery for Resilience: Exploring the Disconnect Between Collaborative Planning and Project Implementation in Post-Hurricane Sandy New York City. Journal of Disaster Research, 19(6), 956-970.

Li, F., Chavas, D. R., Medeiros, B., Reed, K. A., & Rasmussen, K. L. (2024). Upstream surface roughness and terrain are strong drivers of contrast in tornado potential between North and South America. Proceedings of the National Academy of Sciences, 121(26), e2315425121.

Aslan, I. H., Pourtois, J. D., Chamberlin, A. J., Mitchell, K. R., Mari, L., Lwiza, K. M., … & De Leo, G. A. (2024). Re-assessing thermal response of schistosomiasis transmission risk: evidence for a higher thermal optimum than previously predicted. PLOS Neglected Tropical Diseases, 18(6), e0011836.

Heneghan, J., John, D. C., Bartsch, S. M., Piltch-Loeb, R., Gilbert, C., Kass, D., … & Lee, B. Y. (2024). A Systems Map of the Challenges of Climate Communication. Journal of Health Communication, 1-12.

Sherwood, S. C., Hegerl, G., Braconnot, P., Friedlingstein, P., Goelzer, H., Harris, N. R. P., …, Reed, K. A., … & van der Wel, N. P. M. (2024). Uncertain Pathways to a Future Safe Climate. Earth’s Future, 12(6), e2023EF004297.

Li, R., Li, W., Gilbert, C., Zheng, X., & Lindenfeld Sher, L. (2024). Dynamic Fear in Fear Appeals: Applying Fear Appeals to Environmental Communication in China. Journal of Health Communication, 1-9.

Strohm, V. R., Ayache, N., Millette, N. C., Menegay, A., Gobler, C. J., Campbell, L., & Smith, J. L. (2024). Role of Turbulence in Dinophysis spp. Growth, Feeding, and Toxin Leakage in Culture. Harmful Algae, 102666.

Gobler, C. J., Di Cecco, G. J., Doherty, O. M., & Kramer, B. J. (2024). Decadal warming has intensified Microcystis‐dominated cyanobacterial blooms in Lake Erie. Limnology and Oceanography Letters.

Napoli, C., Hirtle, N., Stepanuk, J., Christiansen, F., Heywood, E. I., Grove, T., … & Thorne, L. Drone-based photogrammetry reveals differences in humpback whale body condition and mass across North Atlantic foraging grounds. Frontiers in Marine Science, 11, 1336455.

Leone, M. T., & Warren, J. D. (2024). Vessels and aircraft are chronic sources of anthropogenic noise in coastal marine and terrestrial soundscapes on Long Island, New York. Environmental Pollution, 124208.

Thorne, L.H. and Wiley, D.N. (2024). Evaluating drivers of recent large whale strandings on the East Coast of the United States. Conservation Biology. http://doi.org/10.1111/cobi.14302

Goetze, J. S., Heithaus, M. R., MacNeil, M. A., Harvey, E., Simpfendorfer, C. A., Heupel, M. R., … Peterson, B. J., … Warren, J. D., … & Chapman, D. D. (2024). Directed conservation of the world’s reef sharks and rays. Nature Ecology & Evolution, 1-11.

Tuftedal, K. S., Treserras, B. P., Oue, M., & Kollias, P. (2024). Shallow-and deep-convection characteristics in the greater Houston, Texas, area using cell tracking methodology. Atmospheric Chemistry and Physics, 24(9), 5637-5657.

Pitt, J. R., Lopez-Coto, I., Karion, A., Hajny, K. D., Tomlin, J., Kaeser, R., … & Shepson, P. B. (2024). Underestimation of Thermogenic Methane Emissions in New York City. Environmental Science & Technology.

Wilson, S. J., Moody, A., McKenzie, T., Cardenas, M. B., Luijendijk, E., Sawyer, A. H., … Bokuniewicz, H.J., … & Santos, I. R. (2024). Global subterranean estuaries modify groundwater nutrient loading to the ocean. Limnology and Oceanography Letters.

Ayache, N., Campbell, L., Gobler, C. J., & Smith, J. L. (2024). Photoacclimation and photophysiology of four species of toxigenic Dinophysis. Harmful Algae, 102624.

Carlowicz Lee, R. M., Keiling, T. D., & Warren, J. D. (2024). Seasonal abundance, lipid storage, and energy density of Calanus finmarchicus and other copepod preyfields along the Northwest Atlantic continental shelf. Journal of Plankton Research, fbae014.

Mara, P., Geller-McGrath, D., Suter, E., Taylor, G. T., Pachiadaki, M. G., & Edgcomb, V. P. (2024). Plasmid-Borne Biosynthetic Gene Clusters within a Permanently Stratified Marine Water Column. Microorganisms, 12(5), 929.

Pan, X., Chen, Y., Jiang, T., Yang, J., & Tian, Y. (2024). Otolith biogeochemistry reveals possible impacts of extreme climate events on population connectivity of a highly migratory fish, Japanese Spanish mackerel Scomberomorus niphonius. Marine Life Science & Technology, 1-14.

Faull, L. E. M., Zaliznyak, T., & Taylor, G. T. (2024). From the Caribbean to the Arctic, the most abundant microplastic particles in the ocean have escaped detection. Marine Pollution Bulletin, 202, 116338.

Linner, R., & Chen, Y. (2024). Evaluating the spatial transferability of habitat suitability models: implications for conservation and management. Canadian Journal of Fisheries and Aquatic Sciences, (ja).

Chen, S., Wang, M., Lin, D., Russo, F. M., Gobler, C. J., & Mao, X. (2024). Biofiltration matrix optimization for efficient nitrogen removal from domestic onsite wastewater. Journal of Water Process Engineering, 60, 105208.

Zhang, W., & Wolfe, C. L. (2024). Inferring tracer diffusivity from coherent mesoscale eddies. Journal of Advances in Modeling Earth Systems, 16(4), e2023MS004004.

Collins, M. (2024). Disproportionality. In Elgar Encyclopedia of Environmental Sociology (pp. 136-142). Edward Elgar Publishing.

Lovy, J., Iwanowicz, L. R., Welch, T. J., Allam, B., Getchell, R. G., Geraci-Yee, S., … & Das, N. (2024). Seasonal Mortality of Wild Atlantic Menhaden (Brevoortia tyrannus) Is Caused by a Virulent Clone of Vibrio (Listonella) anguillarum; Implications for Biosecurity along the Atlantic Coastal United States. Transboundary and Emerging Diseases, 2024.

Vieten, R., Warken, S. F., Zanchettin, D., Winter, A., Scholz, D., Black, D., … & Spötl, C. (2024). Northeastern Caribbean Rainfall Variability Linked to Solar and Volcanic Forcing. Paleoceanography and Paleoclimatology, 39(4), e2023PA004720.

Chang, H. Y., Pendleton, R., Kenney, G., McKown, K., Eakin, W., Maniscalco, J., & Chen, Y. (2024). Spatiotemporal dynamics of spawning habitat distribution of American shad (Alosa sapidissima) in the Hudson River Estuary under multi stressors. Canadian Journal of Fisheries and Aquatic Sciences, (ja).

Schultz, J., Gobler, D. L. B., Young, C. S., Perez, A., Doall, M. H., & Gobler, C. J. (2024). Ocean acidification significantly alters the trace element content of the kelp, Saccharina latissima. Marine Pollution Bulletin, 202, 116289.

Willson, J. L., Reed, K. A., Jablonowski, C., Kent, J., Lauritzen, P. H., Nair, R., … & Yoshida, R. (2023). DCMIP2016: the tropical cyclone test case. Geoscientific Model Development Discussions, 2023, 1-27.

Leonardo, N. M., & Colle, B. A. (2024). Analysis of Snow Multi-Bands and Their Environments with High-Resolution Idealized Simulations. Monthly Weather Review.

Lotfikatouli, S., Pan, Q., Wang, M., Russo, F. M., Gobler, C. J., & Mao, X. (2024). Effective nitrogen removal from onsite wastewater using a sequencing aerated biofilm reactor. Journal of Water Process Engineering, 60, 105132.

Knopf, D. A., Ammann, M., Berkemeier, T., Pöschl, U., and Shiraiwa, M. (2024) Desorption lifetimes and activation energies influencing gas–surface interactions and multiphase chemical kinetics, Atmos. Chem. Phys., 24, 3445–3528, https://doi.org/10.5194/acp-24-3445-2024, 2024.

Gallagher, K. L., Cimino, M. A., Dinniman, M. S., & Lynch, H. J. (2024). Quantifying potential marine debris sources and potential threats to penguins on the West Antarctic Peninsula. Environmental Pollution, 123714.

Cohen, A. B., Christensen, L. N., Weber, F., Yagudaeva, M., Lo, E., Henkes, G. A., … & Taylor, G. T. (2024). Preserved particulate organic carbon is likely derived from the subsurface sulfidic photic zone of the Proterozoic Ocean: evidence from a modern, oxygen‐deficient lake. Geobiology, 22(2), e12593.

Motlagh, F., Hamideh, S., Gallagher, M., Yan, G., & van de Lindt, J. W. (2024). Bonds for disaster resilience: A review of literature and practice. International Journal of Disaster Risk Reduction, 104, 104318. https://doi.org/10.1016/J.IJDRR.2024.104318

Zhang, W., Griffies, S. M., Hallberg, R. W., Kuo, Y. H., & Wolfe, C. L. (2024). The role of surface potential vorticity in the vertical structure of mesoscale eddies in wind-driven ocean circulations. Journal of Physical Oceanography.

Silvers, L. G., Stansfield, A. M., & Reed, K. A. (2024). The impact of rotation on tropical climate, the hydrologic cycle, and climate sensitivity. Geophysical Research Letters, 51(5), e2023GL105850.

Gutiérrez-Ariza, C., Barge, L. M., Ding, Y., Cardoso, S. S., McGlynn, S. E., Nakamura, R., … Price, R. E., … & Cartwright, J. H. (2024). Magnesium silicate chimneys at the Strytan hydrothermal field, Iceland, as analogues for prebiotic chemistry at alkaline submarine hydrothermal vents on the early Earth. Progress in Earth and Planetary Science, 11(1), 1-15.

Steinke, J., Coletti, A., & Gilbert, C. (2024). # WomenInSTEM: exploring self-presentation of identity on Instagram. Journal of Science Communication, 23(1), A03.

Bargahi, M., Yazici, A., Finn, D., & Tran, C. (2024). Assessment of accessibility and equality of access in Long Island libraries from the perspective of community resilience. Case Studies on Transport Policy, 101163.

Ghanbari, M., Dell, T., Saleh, F., Chen, Z., Cherrier, J., Colle, B., … & Arabi, M. (2024). Compounding effects of changing sea level and rainfall regimes on pluvial flooding in New York City. Natural Hazards, 1-24.

Czaja Jr, R., Espinosa, E. P., Cerrato, R. M., & Allam, B. (2024). Carryover effects and feeding behavior of Atlantic surfclams in response to climate change. Journal of Experimental Marine Biology and Ecology, 573, 152002.

Leonardo, N. M., & Colle, B. A. (2024). Analysis of Snow Multi-Bands and Their Environments with High-Resolution Idealized Simulations. Monthly Weather Review.

Schwaner, C., Barbosa, M., Espinosa, E. P., & Allam, B. (2024). Probing the role of carbonic anhydrase in shell repair mechanisms in the eastern oyster Crassostrea virginica under experimental acidification stress. Journal of Experimental Marine Biology and Ecology, 572, 151990.

Willse, N., Ober, C., Chang, H. Y., Harlisa, H., Ernawati, T., Kembaren, D. D., … Chen, Y., & Kleisner, K. M. (2024). Linking crustacean life history to fishery management controls and reference points. Fisheries Management and Ecology, e12691.

Bower, E., & Reed, K. A. (2024). Using high resolution climate models to explore future changes in post-tropical cyclone precipitation. Environmental Research Letters, 19(2), 024042.

Herman, R. W., Clucas, G., Younger, J., Bates, J., Robinson, B., Reddy, S., … & Lynch, H. J. (2024). Whole genome sequencing reveals stepping‐stone dispersal buffered against founder effects in a range expanding seabird. Molecular Ecology, e17282.

Dwyer, I. P., Perger, D. A. S., Graffam, M., Aller, R. C., Wehrmann, L. M., & Volkenborn, N. (2024). Seasonality of bioirrigation by the maldanid polychaete Clymenella torquata and related oxygen dynamics in permeable sediments. Journal of Experimental Marine Biology and Ecology, 572, 151987.

Geraci-Yee, S., Collier, J. L., & Allam, B. (2024). A Microcosm Experiment Reveals the Temperature-Sensitive Release of Mucochytrium quahogii (= QPX) from Hard Clams and Pallial Fluid as a Stable QPX Reservoir. Microorganisms, 12(2), 241.

Schwaner, C., Barbosa, M., Haley, J., Espinosa, E. P., & Allam, B. (2024). Transcriptomics, proteomics, and physiological assays reveal immunosuppression in the eastern oyster Crassostrea virginica exposed to acidification stress. Fish & Shellfish Immunology, 109366.

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Shipley, O. N., Henkes, G. A., Gelsleichter, J., Morgan, C., Schneider, E. V., Talwar, B., & Frisk, M. G. (2021). Shark tooth collagen stable isotopes (δ15N and δ13C) as ecological proxies. Journal of Animal Ecology.

Li, J., & Knopf, D. A. (2021). Representation of Multiphase OH Oxidation of Amorphous Organic Aerosol for Tropospheric Conditions. Environmental Science & Technology.

Cernadas-Martín, S., Rountos, K. J., Nye, J. A., Frisk, M. G., & Pikitch, E. K. (2021). Composition and intraspecific variability in Summer flounder (Paralichthys dentatus) diets in a eutrophic estuary. Frontiers in Marine Science.

Wang, Y., Zheng, G., Jensen, M., Knopf, D., Laskin, A., Matthews, A., … & Wang, J. (2021). Vertical profiles of trace gas and aerosol properties over the Eastern North Atlantic: Variations with season and synoptic condition. Atmospheric Chemistry and Physics Discussions, 1-39.

Zhang, T., Lin, W., Vogelmann, A. M., Zhang, M., Xie, S., Qin, Y., & Golaz, J. C. (2021). Improving Convection Trigger Functions in Deep Convective Parameterization Schemes Using Machine Learning. Journal of Advances in Modeling Earth Systems, e2020MS002365.

Geller, M. A., Love, P. T., & Wang, L. (2021). A Climatology of Unstable Layers in the Troposphere and Lower Stratosphere: Some Early Results. Monthly Weather Review, 149(5), 1233-1245.

Zarzycki, C. M., Ullrich, P. A., & Reed, K. A. (2021). Metrics for evaluating tropical cyclones in climate data. Journal of Applied Meteorology and Climatology, 60(5), 643-660.

Zhu, Q., Cochran, J. K., Heilbrun, C., Yin, H., Feng, H., Tamborski, J. J., … & Cong, W. (2021). Small-Scale Geochemical Heterogeneities and Seasonal Variation of Iron and Sulfide in Salt Marshes Revealed by Two-Dimensional Sensors. Frontiers in Earth Science, 9, 287.

Sanchez, D., Seco, R., Gu, D., Guenther, A., Mak, J., Lee, Y., … & Kim, S. (2021). Contributions to OH reactivity from unexplored volatile organic compounds measured by PTR-ToF-MS–a case study in a suburban forest of the Seoul metropolitan area during the Korea–United States Air Quality Study (KORUS-AQ) 2016. Atmospheric Chemistry and Physics, 21(8), 6331-6345.

Sonmez Baghirzade, B., Zhang, Y., Reuther, J. F., Saleh, N. B., Venkatesan, A. K., & Apul, O. G. (2021). Thermal Regeneration of Spent Granular Activated Carbon Presents an Opportunity to Break the Forever PFAS Cycle. Environmental Science & Technology, 55(9), 5608-5619.

Medina Faull LE, Zaliznyak T, and Taylor GT. (2021) Assessing diversity, abundance, and mass of microplastics (~ 1–300 μm) in aquatic systems Limnology and Oceanography: Methods. doi: 10.1002/lom3.10430

Roose, H., Paterson, G., Frisk, M. G., Cerrato, R. M., Nitschke, P., & Olin, J. A. (2021). Regional variation in mercury bioaccumulation among NW Atlantic Golden (Lopholatilus chamaeleonticeps) and Blueline (Caulolatilus microps) Tilefish. Environmental Pollution, 117177.

Young, C. S., Doall, M. H., & Gobler, C. J. (2021). Dual benefit of ocean acidification for the laminarialean kelp Saccharina latissima: enhanced growth and reduced herbivory. Marine Ecology Progress Series, 664, 87-102.

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Patade, S., Phillips, V.T., Amato, P., Bingemer, H.G., Burrows, S.M., DeMott, P.J., Goncalves, F.L., Knopf, D.A., Morris, C.E., Alwmark, C. and Artaxo, P., 2021. Empirical formulation for multiple groups of primary biological ice nucleating particles from field observations over Amazonia. Journal of the Atmospheric Sciences.

Han, T., Zhang, M., Zhu, J., Zhou, B., & Li, S. (2021). Impact of early spring sea ice in Barents Sea on midsummer rainfall distribution at Northeast China. Climate Dynamics, 1-15.

Hattenrath-Lehmann, T. K., Nanjappa, D., Zhang, H., Yu, L., Goleski, J. A., Lin, S., & Gobler, C. J. (2021). Transcriptomic and isotopic data reveal central role of ammonium in facilitating the growth of the mixotrophic dinoflagellate, Dinophysis acuminata. Harmful Algae, 104, 102031.

Finn, Donovan Finn (2020) Streets, Sidewalks and COVID-19: Reimaging New York City’s Public Realm as a Tool for Crisis Management. Journal of Extreme Events Online Ready. https://doi.org/10.1142/S2345737621500068

Khimasia, A., Renshaw, C., Price, R. E., & Pichler, T. (2021). Hydrothermal flux and porewater geochemistry in Paleochori Bay, Milos, Greece. Chemical Geology, 120188.

Hamideh, S., Peacock, W. G., & Van Zandt, S. (2021). Housing Type Matters for Pace of Recovery: Evidence from Hurricane Ike. International Journal of Disaster Risk Reduction, 102149.

Stepanuk, J. E., Heywood, E. I., Lopez, J. F., DiGiovanni Jr, R. A., & Thorne, L. H. (2021). Age-specific behavior and habitat use in humpback whales: implications for vessel strike. Marine Ecology Progress Series, 663, 209-222.

Yin, H., Aller, R. C., Zhu, Q., & Aller, J. Y. (2021). The dynamics of cable bacteria colonization in surface sediments: a 2D view. Scientific Reports, 11(1), 1-8.

Luke, E. P., Yang, F., Kollias, P., Vogelmann, A. M., & Maahn, M. (2021). New insights into ice multiplication using remote-sensing observations of slightly supercooled mixed-phase clouds in the Arctic. Proceedings of the National Academy of Sciences, 118(13).

Gevao, B., Uddin, S., Fowler, S. W., Behbehani, M., & Aba, A. (2021). Depositional time trends of phosphorous accumulation in a dated sediment core from the northwestern Arabian Gulf: Can phosphorous be used to support 210Pb chronologies in coastal aquatic sediments?. Marine Pollution Bulletin, 166, 112213.

Shi, R., Han, T., Xu, S., Huang, H., Qi, Z., & Zhu, Q. (2021). Bacterial community responses to the redox profile changes of mariculture sediment. Marine Pollution Bulletin, 166, 112250.

O’Connell, C., & McKinnon, M. (2021). Perceptions of Barriers to Career Progression for Academic Women in STEM. Societies, 11(2), 27.

Colle, B. A., Auld, R., Johnson, K., O’Connell, C., Taylor, T. G., & Rice, J. (2021). Improving Communication of Uncertainty and Risk of High-Impact Weather Through Innovative Forecaster Workshops. Bulletin of the American Meteorological Society, 1-18.

Lucca, B. M., Ressler, P. H., Harvey, H. R., & Warren, J. D. (2021). Individual variability in sub-Arctic krill material properties, lipid composition, and other scattering model inputs affect acoustic estimates of their population. ICES Journal of Marine Science.

Kang, Y., Harke, M. J., Berry, D. L., Collier, J. L., Wilhelm, S. W., Dyhrman, S. T., & Gobler, C. J. (2021). Transcriptomic Responses of Four Pelagophytes to Nutrient (N, P) and Light Stress. Frontiers in Marine Science, 8, 223.

Gao, Y., Henkes, G. A., Cochran, J. K., & Landman, N. H. (2021). Temperatures of Late Cretaceous (Campanian) methane-derived authigenic carbonates from the Western Interior Seaway, South Dakota, USA, using clumped isotopes. GSA Bulletin.

Park, C., Son, S. W., & Kim, H. (2021). Distinct features of atmospheric rivers in the early versus late East Asian summer monsoon and their impacts on monsoon rainfall. Journal of Geophysical Research: Atmospheres, 126(7), e2020JD033537.

Anderson, D. M., Fensin, E., Gobler, C. J., Hoeglund, A. E., Hubbard, K. A., Kulis, D. M., … & Trainer, V. L. (2021). Marine harmful algal blooms (HABs) in the United States: History, current status and future trends. Harmful Algae, 101975.

M. Kanabar, S. Bauer, Z.M. Ezedum, I.P. Dwyer, W.S.. Moore, G. Rodriguez, A. Mall, A.T. Littleton, M. Yudell, J. Kanabar, W.J. Tucker, E.R. Daniels, M. Iqbal, H. Khan, A. Mirza, J. C. Yu, M. O’Neal, N. Volkenborn, S.T. Pochron. (2021). Roundup negatively impacts the behavior and nerve function of the Madagascar hissing cockroach (Gromphadorhina portentosa). Environmental Science and Pollution Research, 1-12.

Pringle, W. J., Wirasaet, D., Roberts, K. J., & Westerink, J. J. (2021). Global storm tide modeling with ADCIRC v55: unstructured mesh design and performance. Geoscientific Model Development, 14(2), 1125-1145.

Pascucci, D., Gobler, C. J., & Rountos, K. J. (2021). Harmful dinoflagellate Cochlodinium polykrikoides impairs the feeding behavior of larval sheepshead minnows (Cyprinodon variegatus). Journal of Fish Biology.

Cossa, D., Fowler, S. W., Migon, C., Heimbürger‐Boavida, L. É., & Dufour, A. (2020). A Biogeochemical Approach to Contamination of the Ligurian Sea. The Mediterranean Sea in the Era of Global Change 2: 30 Years of Multidisciplinary Study of the Ligurian Sea, 175-205.

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Conners, M. G., Michelot, T., Heywood, E. I., Orben, R. A., Phillips, R. A., Vyssotski, A. L., … & Thorne, L. H. (2021). Hidden Markov models identify major movement modes in accelerometer and magnetometer data from four albatross species. Movement ecology, 9(1), 1-16.

Floerchinger, C., Shepson, P. B., Hajny, K., Daube, B. C., Stirm, B. H., Sweeney, C., & Wofsy, S. C. (2021). Relative flux measurements of biogenic and natural gas-derived methane for seven US cities. Elementa: Science of the Anthropocene, 9(1).

Burnett, A. C., Sheshadri, A., Silvers, L. G., & Robinson, T. Tropical Cyclone Frequency under Varying SSTs in Aquaplanet Simulations. Geophysical Research Letters, e2020GL091980.

Tyrell, A. S., Jiang, H., & Fisher, N. S. (2021). Effects of seawater viscosity and temperature on the movement of the marine dinoflagellate Prorocentrum minimum. Aquatic Microbial Ecology, 86, 21-28.

Shipley, O. N., Newton, A. H., Frisk, M. G., Henkes, G. A., LaBelle, J., Camhi, M., … & Olin, J. A. Telemetry validated nitrogen stable isotope clocks identify ocean‐to‐estuarine habitat shifts in mobile organisms. Methods in Ecology and Evolution.

Gobler, C. J., Waugh, S., Asato, C., Clyde, P. M., Nyer, S. C., Graffam, M., … & Walker, H. W. (2021). Removing 80%–90% of nitrogen and organic contaminants with three distinct passive, lignocellulose-based on-site septic systems receiving municipal and residential wastewater. Ecological Engineering, 161, 106157.

Lato, K. A., Thorne, L. H., Fuirst, M., & Brownawell, B. J. (2021). Microplastic abundance in gull nests in relation to urbanization. Marine Pollution Bulletin, 164, 112058.

Owen, K., Saeki, K., Warren, J. D., Bocconcelli, A., Wiley, D. N., Ohira, S. I., … & Zitterbart, D. P. (2021). Natural dimethyl sulfide gradients would lead marine predators to higher prey biomass. Communications Biology, 4(1), 1-8.

Geraci-Yee, S., Brianik, C. J., Rubin, E., Collier, J. L., & Allam, B. (2021). Erection of a New Genus and Species for the Pathogen of Hard Clams ‘Quahog Parasite Unknown’(QPX): Mucochytrium quahogii gen. nov., sp. nov. Protist, 125793.

Young, C. S., & Gobler, C. J. (2021). Coastal ocean acidification and nitrogen loading facilitate invasions of the non-indigenous red macroalga, Dasysiphonia japonica. Biological Invasions, 1-25.

Bire, S., & Wolfe, C. L. (2021). The Role of eddies in the zonal and meridional overturning circulations of buoyancy-forced basins. Journal of Physical Oceanography.

Reed, K., Wehner, M. F., Stansfield, A. M., & Zarzycki, C. M. (2021). Anthropogenic Influence on Hurricane Dorian’s Extreme Rainfall. Bulletin of the American Meteorological Society, 102(1), S9-S15.

Rocha, C., Robinson, C. E., Santos, I. R., Waska, H., Michael, H. A., & Bokuniewicz, H. J. A place for subterranean estuaries in the coastal zone. Estuarine, Coastal and Shelf Science, 107167.

Gallagher, A. J., Shipley, O. N., van Zinnicq Bergmann, M. P., Brownscombe, J. W., Dahlgren, C. P., Frisk, M. G., … & Duarte, C. M. (2021). Spatial Connectivity and Drivers of Shark Habitat Use Within a Large Marine Protected Area in the Caribbean, The Bahamas Shark Sanctuary. Frontiers in Marine Science.

Lee, C. S., Asato, C., Wang, M., Mao, X., Gobler, C. J., & Venkatesan, A. K. (2021). Removal of 1, 4-dioxane during on-site wastewater treatment using nitrogen removing biofilters. Science of The Total Environment, 144806.

Cade, D. E., Seakamela, S. M., Findlay, K. P., Fukunaga, J., Kahane‐Rapport, S. R., Warren, J. D., … & Goldbogen, J. Predator‐scale spatial analysis of intra‐patch prey distribution reveals the energetic drivers of rorqual whale super‐group formation. Functional Ecology.

Cade, D. E., Seakamela, S. M., Findlay, K. P., Fukunaga, J., Kahane‐Rapport, S. R., Warren, J. D., … & Goldbogen, J. Predator‐scale spatial analysis of intra‐patch prey distribution reveals the energetic drivers of rorqual whale super‐group formation. Functional Ecology.

Ye, X., Rountos, K. J., Lee, C. S., & Fisher, N. S. Effects of methylmercury on the early life stages of an estuarine forage fish using two different dietary sources. Marine Environmental Research, 105240.

Fueglistaler, S., & Silvers, L. G. (2021). The peculiar trajectory of global warming. Journal of Geophysical Research: Atmospheres, e2020JD033629.

Gurr, S. J., Dwyer, I. P., Goleski, J., Lima, F. P., Seabra, R., Gobler, C. J., & Volkenborn, N. (2021). Acclimatization in the bay scallop Argopecten irradians along a eutrophication gradient: insights from heartbeat rate measurements during a simulated hypoxic event. Marine and Freshwater Behaviour and Physiology, 1-27.

Espinosa, E. P., & Allam, B. (2021). High spatial resolution mapping of the mucosal proteome of the gills of Crassostrea virginica: implication in particle processing. Journal of Experimental Biology.

Shipley, O. N., Lee, C. S., Fisher, N. S., Sternlicht, J. K., Kattan, S., Staaterman, E. R., … & Gallagher, A. J. Metal concentrations in coastal sharks from The Bahamas with a focus on the Caribbean Reef shark. Scientific Reports, 11(1), 1-11.

Morales, A. C., Jayarathne, T., Slade, J. H., Laskin, A., & Shepson, P. B. (2020). The Production and Hydrolysis of Organic Nitrates from OH Radical Oxidation of β-Ocimene. Atmospheric Chemistry and Physics Discussions, 1-31.

Sogut, E., & Farhadzadeh, A. (2021). Numerical Study of Longshore Variation in Beach Morphodynamics along Eastern Lake Erie Shoreline due to Seiche. Journal of Coastal Research, 37(1), 92-103.

Zhang, G., Silvers, L. G., Zhao, M., & Knutson, T. R. (2020). Idealized aqua-planet simulations of tropical cyclone activity: significance of temperature gradients, hadley circulation, and zonal asymmetry. Journal of the Atmospheric Sciences.

Walker, B. D., Beaupré, S. R., Griffin, S., Walker, J., Druffel, E., & Xu, X. (2020). A sealed‐tube method for offline δ13C analysis of CO2 via a Gas Bench II continuous flow isotope ratio mass spectrometer. Rapid Communications in Mass Spectrometry.

Silvers, L. G., & Robinson, T. (2020). Clouds and Radiation in a mock‐Walker Circulation. Journal of Advances in Modeling Earth Systems, e2020MS002196.

Wakeham, S. G., Lee, C., Arnosti, C., Dittmar, T., Hinrichs, K. U., & Pearson, A. (2020). Current Topics in Marine Organic Biogeochemical Research. Frontiers in Marine Science.

Chai, Z., Zhang, M., Zeng, Q., Xie, J., You, T., & Zhang, H. (2020). nSimulation of the QBO in IAP-AGCM: Analysis of momentum budget: IAP-AGCM 对 QBO 模拟的动量收支分析. Atmospheric and Oceanic Science Letters, 100021.

Gobler, C. J., & Tang, Y. Z. Laboratory Culture-Based Characterization of the Resting Stage Cells of the Brown-Tide-Causing Pelagophyte, Aureococcus anophagefferens. Journal of Marine Science and Engineering, 8(12), 1027. doi:http://dx.doi.org/10.3390/jmse8121027

Ma, Z., Hu, Z., Deng, Y., Shang, L., Gobler, C. J., & Tang, Y. Z. (2020). Laboratory Culture-Based Characterization of the Resting Stage Cells of the Brown-Tide-Causing Pelagophyte, Aureococcus anophagefferens. Journal of Marine Science and Engineering, 8(12), 1027.

Kang, P., H. Zhang, Z. Yang, Y. Zhu, B. He, Q. Li, C. Lee, T. Tang. 2021. A model of algal organic carbon distributions in the Pearl River estuary using the amino acid carbon isotope values. Geochim. Cosmochim. Acta, 294: 1-12. https://doi.org/10.1016/j.gca.2020.11.010

Jones, J. P., Firdosy, S. A., Barge, L. M., Bescup, J. C., Perl, S. M., Zhang, X., … & Price, R. E. (2020). 3D Printed Minerals as Astrobiology Analogs of Hydrothermal Vent Chimneys. Astrobiology.

Zhang, J., Mak, J., Wei, Z., Cao, C., Ninneman, M., Marto, J., & Schwab, J. J. (2020). Long Island enhanced aerosol event during 2018 LISTOS: association with heatwave and marine influences. Environmental Pollution, 116299.

Allam, S., Allam, B., & Pales Espinosa, E. (2020). Regulation of mucosal lectins in the oyster Crassostrea virginica in response to food availability and environmental factors. Journal of Molluscan Studies.

Richter, J. H., Pegion, K., Sun, L., Kim, H., Caron, J. M., Glanville, A., … & Collins, D. (2020). Subseasonal prediction with and without a well-represented stratosphere in CESM1. Weather and Forecasting, 35(6), 2589-2602.

Allam, S., Allam, B., & Pales Espinosa, E. (2020). Regulation of mucosal lectins in the oyster Crassostrea virginica in response to food availability and environmental factors. Journal of Molluscan Studies.

Zhu, Z., Kollias, P., Yang, F., & Luke, E. (2021). On the estimation of in‐cloud vertical air motion using radar Doppler spectra. Geophysical Research Letters, 48(1), e2020GL090682.

Knopf, D. (2020). Multiphase chemical kinetics and cloud formation by organic aerosol. Bulletin of the American Physical Society.

Liu, Y., Shah, V., Borowicz, A., Wethington, M., Strycker, N., Forrest, S., Lynch, H. & Singh, H. Towards Efficient Machine Learning Methods for Penguin Counting in Unmanned Aerial System Imagery. In 2020 IEEE/OES Autonomous Underwater Vehicles Symposium (AUV)(50043) (pp. 1-7). IEEE.

Stuart, C. E., Green, S. J., Vernygora, O., LeBlanc, A. R., Bertschi, M. H., & Brown, M. (2020). New insights into patterns and rates of tooth replacement in serrasalmid and characid fishes, with implications for the subsistence fishery of Peru’s remote ribereños villages. Journal of Fish Biology.

Jacob, M., Kollias, P., Ament, F., Schemann, V., & Crewell, S. (2020). Multilayer cloud conditions in trade wind shallow cumulus–confronting two ICON model derivatives with airborne observations. Geoscientific Model Development, 13(11), 5757-5777.

Kleinhaus, K., Voolstra, C. R., Meibom, A., Amitai, Y., Gildor, H., and Fine, M. (2020). A closing window of opportunity to save a unique marine ecosystem. Frontiers in Marine Science.

Leonardo, N. M., & Colle, B. A. (2020). An Investigation of Large Cross-Track Errors in North Atlantic Tropical Cyclones in the GEFS and ECMWF Ensembles. Monthly Weather Review.

Zheng, C., Chang, E. K. M., Kim, H., Zhang, M., & Wang, W. (2020). Subseasonal Prediction of Wintertime Northern Hemisphere Extratropical Cyclone Activity by SubX and S2S Models. Weather and Forecasting.

Ansmann, A., Ohneiser, K., Mamouri, R. E., Knopf, D. A., Veselovskii, I., Baars, H., … & Barja, B. (2020). Tropospheric and stratospheric wildfire smoke profiling with lidar: Mass, surface area, CCN and INP retrieval. Atmospheric Chemistry and Physics Discussions, 1-45.

Dvarskas, A., Bricker, S. B., Wikfors, G. H., Bohorquez, J. J., Dixon, M. S., & Rose, J. M. (2020). Quantification and Valuation of Nitrogen Removal Services Provided by Commercial Shellfish Aquaculture at the Subwatershed Scale. Environmental Science & Technology.

Wu, X., Reed, K. A., Wolfe, C. L. P., Marques, G. M., Bachman, S. D., & Bryan, F. O. (2021). Coupled Aqua and Ridge planets in the Community Earth System Model. Journal of Advances in Modeling Earth Systems. doi:10.1029/2020MS002418

Strycker, N., Borowicz, A., Wethington, M., Forrest, S., Shah, V., Liu, Y., … & Lynch, H. J. (2020). Fifty-year change in penguin abundance on Elephant Island, South Shetland Islands, Antarctica: results of the 2019–20 census. Polar Biology, 1-12.

Schwemmer, T. G., Baumann, H., Murray, C. S., Molina, A. I., & Nye, J. A. (2020). Acidification and hypoxia interactively affect metabolism in embryos, but not larvae, of the coastal forage fish Menidia menidia. Journal of Experimental Biology, 223(22).

Drueke, S., Kirshbaum, D. J., & Kollias, P. (2020). Environmental sensitivities of shallow-cumulus dilution–Part 1: Selected thermodynamic conditions. Atmospheric Chemistry and Physics, 20(21), 13217-13239.

Evers, D. C., Sauer, A. K., Burns, D. A., Fisher, N. S., Bertok, D. C., Adams, E. M., … & Driscoll, C. T. (2020). A synthesis of patterns of environmental mercury inputs, exposure and effects in New York State. Ecotoxicology, 1-25.

Strycker, N., Wethington, M., Borowicz, A., Forrest, S., Witharana, C., Hart, T., & Lynch, H. J. (2020). A global population assessment of the Chinstrap penguin (Pygoscelis antarctica). Scientific reports, 10(1), 1-11.

Pochron, S. T., Mirza, A., Mezic, M., Chung, E., Ezedum, Z., Geraci, G., … & Tucker, W. J. Earthworms Eisenia fetida recover from Roundup exposure. Applied Soil Ecology, 158, 103793.

Tomlin, J. M., Jankowski, K. A., Rivera-Adorno, F. A., Fraund, M., China, S., Stirm, B. H., … Shepson, P.B. & Laskin, A. (2020). Chemical Imaging of Fine Mode Atmospheric Particles Collected from a Research Aircraft over Agricultural Fields. ACS Earth and Space Chemistry.

Sprintall, J., Coles, V. J., Reed, K. A., Butler, A. H., Foltz, G. R., Penny, S. G., & Seo, H. (2020). Best Practice Strategies for Process Studies Designed to Improve Climate Modeling. Bulletin of the American Meteorological Society, 101(10), E1842-E1850.

Zhang, H., Zhang, M., Jin, J., Fei, K., Ji, D., Wu, C., … & Zhu, J. (2020). CAS‐ESM 2: Description and Climate Simulation Performance of the Chinese Academy of Sciences (CAS) Earth System Model (ESM) Version 2. Journal of Advances in Modeling Earth Systems, e2020MS002210.

Thorne, L. H., Fuirst, M., Veit, R., & Baumann, Z. Mercury concentrations provide an indicator of marine foraging in coastal birds. Ecological Indicators, 121, 106922.

Borowicz, A., Forrest, S., Wethington, M., Strycker, N., & Lynch, H. J. (2020). Presence of King penguins (Aptenodytes patagonicus) on Elephant Island provides further evidence of range expansion. Polar Biology, 1-4.

Silber, I., Fridlind, A. M., Verlinde, J., Ackerman, A. S., Cesana, G. V., & Knopf, D. A. (2020). The Prevalence of Precipitation from Polar Supercooled Clouds. Atmospheric Chemistry and Physics Discussions, 1-32.

Akinsanola, A. A., Kooperman, G. J., Reed, K. A., Pendergrass, A. G., & Hannah, W. M. (2020). Projected changes in seasonal precipitation extremes over the United States in CMIP6 simulations. Environmental Research Letters.

Knopf, D. A., DeMott, P., Creamean, J., Hill, T., Riemer, N., Hiranuma, N., … & West, M. (2020). Aerosol-Ice Formation Closure Pilot Study (AEROICSTUDY) Field Campaign Report (No. DOE/SC-ARM-20-017). Oak Ridge National Lab.(ORNL), Oak Ridge, TN (United States).

Zaytsev, A., Breitenlechner, M., Novelli, A., Fuchs, H., Knopf, D. A., Kroll, J. H., & Keutsch, F. N. (2020). Application of chemical derivatization techniques combined with chemical ionization mass spectrometry to detect stabilized Criegee intermediates and peroxy radicals in the gas phase. Atmospheric Measurement Techniques Discussions, 1-20.

Farhat, S., Tanguy, A., Espinosa, E. P., Guo, X., Boutet, I., Smolowitz, R., … & Allam, B. (2020). Identification of variants associated with hard clam, Mercenaria, resistance to Quahog Parasite Unknown disease. Genomics.

Kim, S., Seco, R., Gu, D., Sanchez, D., Jeong, D., Guenther, A.B., Lee, Y., Mak, J.E., Su, L., Kim, D.B. and Lee, Y., 2020. The role of a suburban forest in controlling vertical trace gas and OH reactivity distributions–a case study for the Seoul metropolitan area. Faraday Discussions.

Kumjian, M. R., Tobin, D. M., Oue, M., & Kollias, P. (2020). Microphysical Insights into Ice Pellet Formation Revealed by Fully Polarimetric Ka-Band Doppler Radar. Journal of Applied Meteorology and Climatology, 59(10), 1557-1580.

Green, T. and D. Finn (2020) A Return to State-Led Integrated Regional Planning? Emerging Approaches from Three U.S. States. State and Local Government Review. https://doi.org/10.1177/0160323X20960212

Olin, J. A., Shipley, O. N., Cerrato, R. M., Nitschke, P., Magen, C., & Frisk, M. G. Separation of realized ecological niche axes among sympatric tilefishes provides insight into potential drivers of co‐occurrence in the NW Atlantic. Ecology and Evolution.

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Muller-Karger F, Astor Y, Benitez-Nelson C, Buck K, Fanning K, Lorenzoni L, Montes E, Scranton M, Rueda-Roa D, Taylor G, Thunell R, Tappa E, Varela R. (2019). Scientific legacy of the CARIACO oceanographic time-series program. Annual Review of Marine Sciences 11:413–37.

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Shipley, O. N., Lee, C. S., Fisher, N. S., Burruss, G., Frisk, M. G., Brooks, E. J., … & Madigan, D. J. (2019). Trophodynamics and mercury bioaccumulation in reef and open-ocean fishes from The Bahamas with a focus on two teleost predators. Marine Ecology Progress Series, 608, 221-232.

Xie, J., Zhang, M., & Liu, H. (2019). Role of Arctic sea ice in the 2014–15 Eurasian warm winter. Geophysical Research Letters.

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Fuirst, M., Veit, R. R., Hahn, M., Dheilly, N., & Thorne, L. H. (2018). Effects of urbanization on the foraging ecology and microbiota of the generalist seabird Larus argentatus. PloS one, 13(12), e0209200.

Herrington, A. R., Lauritzen, P. H., Taylor, M. A., Goldhaber, S., Eaton, B. E., Bacmeister, J. T., … & Ullrich, P. A. (2019). Physics–Dynamics Coupling with Element-Based High-Order Galerkin Methods: Quasi-Equal-Area Physics Grid. Monthly Weather Review, 147(1), 69-84.

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Zheng, G., Wang, Y., Aiken, A. C., Gallo, F., Jensen, M. P., Kollias, P., … & Wood, R. (2018). Marine boundary layer aerosol in the eastern North Atlantic: seasonal variations and key controlling processes. Atmospheric Chemistry and Physics, 18(23), 17615-17635.

Tomasetti S.J., Morrell B.K., Merlo L.R., Gobler C.J. (2018). Individual and combined effects of low dissolved oxygen and low pH on survival of early stage larval blue crabs, Callinectes sapidus. PLoS ONE 13(12): e0208629. https://doi.org/10.1371/journal.pone.0208629

Khairoutdinov, M. F., & Emanuel, K. (2018). Intraseasonal Variability in a Cloud-Permitting Near-Global Equatorial Aquaplanet Model. Journal of the Atmospheric Sciences, 75(12), 4337-4355.

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Schultz, D. M., Bosart, L. F., Colle, B. A., Davies, H. C., Dearden, C., Keyser, D., … & Winters, A. C. (2018). Extratropical Cyclones: A Century Of Research On Meteorology’s Centerpiece. Meteorological Monographs.

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Chandrasekhar, D., Xiao, Y., Rothfeder, R. and Finn, D. (2018). What drives household recovery after disasters? A case study of New York City after 2012 Hurricane Sandy. Journal of Environmental Planning and Management. https://doi.org/10.1080/09640568.2018.1492907

Zhou, Y., Kim, H., & Guan, B. (2018). Life Cycle of Atmospheric Rivers: Identification and Climatological Characteristics. Journal of Geophysical Research: Atmospheres.

Young, C. S., & Gobler, C. J. (2018). The ability of macroalgae to mitigate the negative effects of ocean acidification on four species of North Atlantic bivalve. Biogeosciences, 15(20), 6167-6183.

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Kopec, A. D., Kidd, K. A., Fisher, N. S., Bowen, M., Francis, C., Payne, K., & Bodaly, R. A. (2019). Spatial and temporal trends of mercury in the aquatic food web of the lower Penobscot River, Maine, USA, affected by a chlor-alkali plant. Science of The Total Environment, 649, 770-791.

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Xiao, Y., Wu, K., Finn, D. and Chandrasekar, D. (2018) “Community Businesses as Social Units in Post-Disaster Recovery,” Journal of Planning Education and Research. https://doi.org/10.1177/0739456X18804328

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Stepanuk, J. E., Read, A. J., Baird, R. W., Webster, D. L., & Thorne, L. H. (2018). Spatiotemporal patterns of overlap between short-finned pilot whales and the US pelagic longline fishery in the Mid-Atlantic Bight: An assessment to inform the management of fisheries bycatch. Fisheries Research, 208, 309-320.

Röhr, M. E., Holmer, M., Baum, J. K., Björk, M., Chin, D., Chalifour, L., Peterson, B., … & Duffy, J. E. Blue carbon storage capacity of temperate eelgrass (Zostera marina) meadows. Global Biogeochemical Cycles.

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Rossby, T., Flagg, C., Chafik, L., Harden, B., & Søiland, H. (2018). A Direct Estimate of Volume, Heat, and Freshwater Exchange Across the Greenland‐Iceland‐Faroe‐Scotland Ridge. Journal of Geophysical Research: Oceans.

Griffith, A. W., Shumway, S. E., & Gobler, C. J. (2018). Differential Mortality of North Atlantic Bivalve Molluscs During Harmful Algal Blooms Caused by the Dinoflagellate, Margalefidinium polykrikoides. Estuaries and Coasts, 1-14.

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Küchler, N., Kneifel, S., Kollias, P., & Löhnert, U. Revisiting liquid water content retrievals in warm stratified clouds: The modified Frisch. Geophysical Research Letters.

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Gownaris, N. J., Rountos, K. J., Kaufman, L., Kolding, J., Lwiza, K. M. M., & Pikitch, E. K. (2018). Water level fluctuations and the ecosystem functioning of lakes. Journal of Great Lakes Research.

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Ohnemus, D. C., Krause, J. W., Brzezinski, M. A., Collier, J. L., Baines, S. B., & Twining, B. S. (2018). The chemical form of silicon in marine Synechococcus. Marine Chemistry.

Rudd, J. W., Bodaly, R. A., Fisher, N. S., Kelly, C. A., Kopec, D., & Whipple, C. (2018). Fifty years after its discharge, methylation of legacy mercury trapped in the Penobscot Estuary sustains high mercury in biota. Science of The Total Environment, 642, 1340-1352.

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Zheng, C., Kar-Man Chang, E., Kim, H. M., Zhang, M., & Wang, W. (2018). Impacts of the Madden–Julian Oscillation on Storm-Track Activity, Surface Air Temperature, and Precipitation over North America. Journal of Climate, 31(15), 6113-6134.

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Chang, E. K. M. (2018). CMIP5 Projected Change in Northern Hemisphere Winter Cyclones with Associated Extreme Winds. Journal of Climate, (2018).

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Wirth, C., & Warren, J. D. (2018). Spatial and temporal variation in toadfish (Opsanus tau) and cusk eel (Ophidion marginatum) mating choruses in eelgrass (Zostera marina) beds in a shallow, temperate estuary. Bioacoustics, 1-18.

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Liou, Y. C., Bluestein, H. B., French, M. M., & Wienhoff, Z. B. (2018). Single-Doppler velocity retrieval of the wind field in a tornadic supercell using mobile, phased-array, Doppler radar data. Journal of Atmospheric and Oceanic Technology, (2018).

Witts, J. D., Landman, N. H., Garb, M. P., Boas, C., Larina, E., Rovelli, R., … & Cochran, J. K. (2018). A fossiliferous spherule-rich bed at the Cretaceous–Paleogene (K–Pg) boundary in Mississippi, USA: Implications for the K–Pg mass extinction event in the Mississippi Embayment and Eastern Gulf Coastal Plain. Cretaceous Research.

Borges, A. V., Speeckaert, G., Champenois, W., Scranton, M. I., & Gypens, N. (2018). Productivity and temperature as drivers of seasonal and spatial variations of dissolved methane in the Southern Bight of the North Sea. Ecosystems, 21(4), 583-599.

Foley, C. M., Hart, T., & Lynch, H. J. (2018). King Penguin populations increase on South Georgia but explanations remain elusive. Polar Biology, 41(6), 1111-1122.

Chen, Y.S., Verlinde, J., Clothiaux, E.E., Ackerman, A.S., Fridlind, A.M., Chamecki, M., Kollias, P., Kirkpatrick, M.P., Chen, B.C., Yu, G. and Avramov, A., (2018). On the forward modeling of radar Doppler spectrum width from LES: Implications for model evaluation. Journal of Geophysical Research: Atmospheres.

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Hinrichs, C., Flagg, C.N. & Wilson, R.E. Estuaries and Coasts: Great South Bay After Sandy: Changes in Circulation and Flushing due to New Inlet (2018). https://doi.org/10.1007/s12237-018-0423-6

Pikitch, E. K. (2018). A tool for finding rare marine species. Science, 360(6394), 1180 LP-1182. 

Feng, H., Qian, Y., Cochran, J. K., Zhu, Q., Heilbrun, C., Li, L., … & Nazareski, E. (2018). Seasonal differences in trace element concentrations and distribution in Spartina alterniflora root tissue. Chemosphere, 204, 359-370.

Landman, N. H., Cochran, J. K., Slovacek, M., Larson, N. L., Garb, M. P., Brezina, J., & Witts, J. D. (2018). Isotope sclerochronology of ammonites (Baculites Compressus) from methane seep and non-seep sites in the Late Cretaceous Western Interior Seaway, USA: Implications for ammonite habitat and mode of life. American Journal of Science, 318(6), 603-639.

Tonjes, D. J., McElroy, A. E., Barnes-Pohjonen, R. K., Ninivaggi, D. V., Dawydiak, W., Greene, G. T., & Brownawell, B. J. (2018). Fate of methoprene in temperate salt marsh ditches following aerial applications. The Science of the total environment, 642, 394.

Madigan, D. J., Snodgrass, O. E., & Fisher, N. S. (2018). From migrants to mossbacks: tracer-and tag-inferred habitat shifts in the California yellowtail Seriola dorsalis. Marine Ecology Progress Series, 597, 221-230.

Madigan, D. J., Snodgrass, O. E., & Fisher, N. S. (2018). From migrants to mossbacks: tracer-and tag-inferred habitat shifts in the California yellowtail Seriola dorsalis. Marine Ecology Progress Series, 597, 221-230.

Finn, D. and Marshall, J.T. (2018) “Superstorm Sandy at Five: Lessons on Law as Catalyst and Obstacle to Long-Term Recovery Following Catastrophic Disasters.” Environmental Law Reporter News and Analysis. Vol 48. June, 2018. 10494-10519.

Cembella, A. D., Tillmann, U., Gobler, C. J., Morton, S. L., Tomas, C. R., Burkholder, J. M., … & Band‐Schmidt, C. J. (2018). Harmful Algal Species Fact Sheets. Harmful Algal Blooms: A Compendium Desk Reference, 561-638.

Lauritzen, P. H., Nair, R. D., Herrington, A. R., Callaghan, P., Goldhaber, S., Dennis, J. M., Reed, K.A., … & Ullrich, P. A. (2018). NCAR Release of CAM‐SE in CESM2. 0: A Reformulation of the Spectral Element Dynamical Core in Dry‐Mass Vertical Coordinates With Comprehensive Treatment of Condensates and Energy. Journal of Advances in Modeling Earth Systems, 10(7), 1537-1570.

Wirth, C., & Warren, J. D. Overlapping use of an artificial reef by humans and an apex predator (Tursiops truncatus) in the New York Bight. Marine Mammal Science.

Yang, F., Kollias, P., Shaw, R. A., & Vogelmann, A. M. (2018). Cloud droplet size distribution broadening during diffusional growth: ripening amplified by deactivation and reactivation. Atmospheric Chemistry and Physics, 18(10), 7313-7328.

Liu, P. (2018). MJO evolution and predictability disclosed by the RMM variant with balanced MJO variance in convection and zonal winds. Climate Dynamics, 1-15.

Kramer, B. J., Davis, T. W., Meyer, K. A., Rosen, B. H., Goleski, J. A., Dick, G. J., … & Gobler, C. J. (2018). Nitrogen limitation, toxin synthesis potential, and toxicity of cyanobacterial populations in Lake Okeechobee and the St. Lucie River Estuary, Florida, during the 2016 state of emergency event. PloS one, 13(5), e0196278.

Landman, N. H., Jicha, B. R., Cochran, J. K., Garb, M. P., Brophy, S. K., Larson, N. L., & Brezina, J. (2018). 40Ar/39Ar date of a bentonite associated with a methane seep deposit in the upper Campanian Baculites compressus Zone, Pierre Shale, South Dakota. Cretaceous Research.

Erickson, M. J., Colle, B. A., & Charney, J. J. (2018). Evaluation and Postprocessing of Ensemble Fire Weather Predictions over the Northeast United States. Journal of Applied Meteorology and Climatology, 57(5), 1135-1153.

Hardisty, D. S., Lyons, T. W., Riedinger, N., Isson, T. T., Owens, J. D., Aller, R. C., … & Masterson, A. L. (2018). An evaluation of sedimentary molybdenum and iron as proxies for pore fluid paleoredox conditions. American Journal of Science, 318(5), 527-556.

Schwaller, M. R., Lynch, H. J., Tarroux, A., & Prehn, B. (2018). A continent-wide search for Antarctic petrel breeding sites with satellite remote sensing. Remote Sensing of Environment, 210, 444-451.

Madigan, D.J., Li, M., Yin, R., Baumann, H., Snodgrass, O.E., Dewar, H., Krabbenhoft, D.P., Baumann, Z., Fisher, N.S., Balcom, P.H. and Sunderland, E.M., (2018). Mercury stable isotopes reveal influence of foraging depth on mercury concentrations and growth in Pacific bluefin tuna. Environmental science & technology.

Ray, R., Michaud, E., Aller, R. C., Vantrepotte, V., Gleixner, G., Walcker, R., … & Thouzeau, G. The sources and distribution of carbon (DOC, POC, DIC) in a mangrove dominated estuary (French Guiana, South America). Biogeochemistry, 1-25.

Youngflesh, C., Jenouvrier, S., Hinke, J. T., DuBois, L., St Leger, J., Trivelpiece, W. Z., … & Lynch, H. J. (2017). Rethinking ‘normal’: The role of stochasticity in the phenology of a synchronously breeding seabird. Journal of Animal Ecology.

Berdalet, E., Kudela, R., Banas, N. S., Bresnan, E., Burford, M. A., Davidson, K., Gobler, C.J. … & Montresor, M. (2018). GlobalHAB: fostering international coordination on harmful algal bloom research in aquatic systems. Global ecology and oceanography of harmful algal blooms. Springer, Cham, 425-447.

Blanton, B., Dresback, K., Colle, B., Kolar, R., Vergara, H., Hong, Y., … & Wachtendorf, T. (2018). An Integrated Scenario Ensemble-Based Framework for Hurricane Evacuation Modeling: Part 2-Hazard Modeling. Risk analysis: an official publication of the Society for Risk Analysis.

Arora, K., Goff, J. A., Wood, L. J., Flood, R. D., & Christensen, B. (2018). Analysis of hummocky bedforms offshore Fire Island, New York, generated by superstorm Sandy. Continental Shelf Research.

Hornstein, J., Espinosa, E. P., Cerrato, R. M., Lwiza, K. M., & Allam, B. (2018). The influence of temperature stress on the physiology of the Atlantic surfclam, Spisula solidissima. Comparative Biochemistry and Physiology Part A: Molecular & Integrative Physiology.

Wang, J., Kim, H. M., Chang, E. K., & Son, S. W. Modulation of the MJO and North Pacific Storm Track Relationship by the QBO. Journal of Geophysical Research: Atmospheres.

Yang, F., Luke, E. P., Kollias, P., Kostinski, A. B., & Vogelmann, A. M. (2018). Scaling of drizzle virga depth with cloud thickness for marine stratocumulus clouds. Geophysical Research Letters.

Farhadzadeh, A., Arabi, M. G., & Bokuniewicz, H. (2018). Contribution of seiche to beach profile evolution in eastern Lake Erie. Shore & Beach, 86(2), 19.

Grosvenor, D. P., Sourdeval, O., Zuidema, P., Ackerman, A., Alexandrov, M. D., Bennartz, R., Kollias, P., et al. (2018). Remote sensing of droplet number concentration in warm clouds: A review of the current state of knowledge and perspectives. Reviews of Geophysics, 56, 409–453.

Chia, M. A., Jankowiak, J. G., Kramer, B. J., Goleski, J. A., Huang, I. S., Zimba, P. V., … & Gobler, C. J. (2018). Succession and toxicity of Microcystis and Anabaena (Dolichospermum) blooms are controlled by nutrient-dependent allelopathic interactions. Harmful Algae, 74, 67-77.

Liu, S., Goff, J. A., Flood, R. D., Christensen, B., & Austin Jr, J. A. (2018). Sorted bedforms off Western Long Island, New York, USA: Asymmetrical morphology and twelve‐year migration record. Sedimentology.

Zhu, J., Zeng, X., Zhang, M., Dai, Y., Ji, D., Li, F., … & Song, X. (2018). Evaluation of the New Dynamic Global Vegetation Model in CAS-ESM. Advances in Atmospheric Sciences, 35(6), 659-670.

Ramesh, K., Melzner, F., Griffith, A. W., Gobler, C. J., Rouger, C., Tasdemir, D., & Nehrke, G. (2018). In vivo characterization of bivalve larval shells: a confocal Raman microscopy study. Journal of The Royal Society Interface, 15(141), 20170723.

Lau, Y. T., Gambino, L., Santos, B., Espinosa, E. P., & Allam, B. (2018). Regulation of oyster (Crassostrea virginica) hemocyte motility by the intracellular parasite Perkinsus marinus: A possible mechanism for host infection. Fish & shellfish immunology, 78, 18-25.

Yu, H., & Zhang, M. (2018). Explaining the Year‐to‐Year Variability of the Eastern Pacific Intertropical Convergence Zone in the Boreal Spring. Journal of Geophysical Research: Atmospheres, 123(8), 3847-3856.

Yu, H., & Zhang, M. (2018). Explaining the Year‐to‐Year Variability of the Eastern Pacific Inter‐Tropical Convergence Zone (ITCZ) in the Boreal Spring. Journal of Geophysical Research: Atmospheres.

O’Leary, B. C., Ban, N. C., Fernandez, M., Friedlander, A. M., García-Borboroglu, P., Golbuu, Y., … Pikitch, E.K. & McCauley, D. J. (2018). Addressing Criticisms of Large-Scale Marine Protected Areas. BioScience.

Wirth, V., Riemer, M., Chang, E. K., & Martius, O. (2018). Rossby Wave Packets on the Midlatitude Waveguide—A Review. Monthly Weather Review, (2018).

Earle, S. A., Wright, D. J., Joye, S., Laffoley, D., Baxter, J., Safina, C., & Elkus, P. (2018). Ocean deoxygenation: Time for action. Science, 359(6383), 1475-1476.

Hartman, R., Espinosa, E. P., & Allam, B. (2018). Identification of clam plasma proteins that bind its pathogen Quahog Parasite Unknown. Fish & Shellfish Immunology, 77, 214-221.

Davidson, R. A., Nozick, L. K., Wachtendorf, T., Blanton, B., Colle, B., Kolar, R. L., … & Leonardo, N. (2018). An Integrated Scenario Ensemble‐Based Framework for Hurricane Evacuation Modeling: Part 1—Decision Support System. Risk analysis.

Zhang, D., Wang, Z., Kollias, P., Vogelmann, A. M., Yang, K., & Luo, T. (2018). Ice particle production in mid-level stratiform mixed-phase clouds observed with collocated A-Train measurements. Atmospheric Chemistry and Physics, 18(6), 4317-4327.

Wang, W., Lee, C., & Primeau, F. (2018). Inferring particle dynamics in the Mediterranean Sea from in-situ pump POC and chloropigment data using Bayesian statistics. Biogeosci. Discuss.

Erickson, M. J., Colle, B. A., & Charney, J. J. (2018). Evaluation and Post-Processing of Ensemble Fire Weather Predictions over the Northeast United States. Journal of Applied Meteorology and Climatology, (2018).

Segre, P. S., Bocconcelli, A., Hickmott, L. S., Howes, G., Warren, J. D., & Chiang, G. (2018). Offshore hummingbird sightings in Chilean Patagonia. The Wilson Journal of Ornithology, 130(3), 796-799.

Gobler, C. J., Merlo, L. R., Morrell, B. K., & Griffith, A. W. (2018). Temperature, Acidification, and Food Supply Interact to Negatively Affect the Growth and Survival of the Forage Fish, Menidia beryllina (Inland Silverside), and Cyprinodon variegatus (Sheepshead Minnow). Frontiers in Marine Science, 5, 86.

Urmy, S. S., & Warren, J. D. (2018). Foraging hotspots of common and roseate terns: the influence of tidal currents, bathymetry, and prey density. Marine Ecology Progress Series, 590, 227-245.

Chi, L., Wolfe, C. L., & Hameed, S. (2018). Intercomparison of the Gulf Stream in ocean reanalyses: 1993− 2010. Ocean Modelling, 125, 1-21.

Wang, J., Kim, H.-M. & Chang, E. K. M. (2018). Interannual Modulation of Northern Hemisphere Winter Storm Tracks by the QBO. Geophysical Research Letters, 45. https://doi.org/10.1002/2017GL076929

Lau, Y. T., Gambino, L., Santos, B., Espinosa, E. P., & Allam, B. (2018). Transepithelial migration of mucosal hemocytes in Crassostrea virginica and potential role in Perkinsus marinus pathogenesis. Journal of invertebrate pathology, 153, 122-129.

Wing, A. A., Reed, K. A., Satoh, M., Stevens, B., Bony, S., & Ohno, T. (2018). Radiative–convective equilibrium model intercomparison project. Geoscientific Model Development, 11(2), 793.

Oue, M., Kollias, P., Ryzhkov, A., & Luke, E. P. (2018). Toward Exploring the Synergy Between Cloud Radar Polarimetry and Doppler Spectral Analysis in Deep Cold Precipitating Systems in the Arctic. Journal of Geophysical Research: Atmospheres.

Gobler, C. J., Merlo, L. R., Morell, B. K., & Griffith, A. W. (2018). Temperature, acidification, and food supply interact to negatively affect the growth and survival of the forage fish, Menidia beryllina (inland silverside) and Cyprinodon variegatus (sheepshead minnow). Frontiers in Marine Science, 5, 86.

Wehner, M. F., Reed, K. A., Loring, B., Stone, D., & Krishnan, H. (2018). Changes in tropical cyclones under stabilized 1.5 and 2.0° C global warming scenarios as simulated by the Community Atmospheric Model under the HAPPI protocols. Earth System Dynamics, 9(1), 187.

Isaacman-VanWertz, G., Massoli, P., O’Brien, R., Lim, C., Franklin, J.P., Moss, J.A., Hunter, J.F., Nowak, J.B., Canagaratna, M.R., Misztal, P.K., Su, L., Knopf, D.A., and Arata, C.,  (2018). Chemical evolution of atmospheric organic carbon over multiple generations of oxidation. Nature Chemistry, p.1.

Dvarskas, A. (2018). Mapping ecosystem services supply chains for coastal Long Island communities: Implications for resilience planning. Ecosystem Services, 30, 14-26.

Shipley, O. N., Murchie, K. J., Frisk, M. G., O’Shea, O. R., Winchester, M. M., Brooks, E. J., … & Power, M. Trophic niche dynamics of three nearshore benthic predators in The Bahamas. Hydrobiologia, 1-12.

Madigan, D. J., Baumann, Z., Carlisle, A. B., Snodgrass, O., Dewar, H., & Fisher, N. S. (2018). Isotopic insights into migration patterns of Pacific bluefin tuna in the eastern Pacific Ocean. Canadian Journal of Fisheries and Aquatic Sciences, (999), 1-11.

Pochron, S., Nikakis, J., Illuzzi, K. et al. (2018). Exposure to aged crumb rubber reduces survival time during a stress test in earthworms (Eisenia fetida). Environ Sci Pollut Res (2018). https://doi.org/10.1007/s11356-018-1433-4

Espinosa, E. P., & Allam, B. (2018). Reverse genetics demonstrate the role of mucosal C-type lectins in food particle selection in the oyster Crassostrea virginica. Journal of Experimental Biology, jeb-174094.

Herrington, A. R., & Reed, K. A. (2018). An Idealized Test of the Response of the Community Atmosphere Model to Near‐Grid‐Scale Forcing Across Hydrostatic Resolutions. Journal of Advances in Modeling Earth Systems, 10(2), 560-575.

Grzelak, K., Tamborski, J., Kotwicki, L., & Bokuniewicz, H. (2018). Ecostructuring of marine nematode communities by submarine groundwater discharge. Marine Environmental Research, 136, 106-119.

Schrimpf, M., Naveen, R., & Lynch, H. J. (2018). Population status of the Antarctic shag Phalacrocorax (atriceps) bransfieldensis. Antarctic Science, 1-9.

Lucca, B. M., & Warren, J. D. (2018). Acoustically Measured Distribution and Abundance of Atlantic Menhaden (Brevoortia tyrannus) in a Shallow Estuary in Long Island, NY. Estuaries and Coasts, 1-12.

Smirnov, O., Steinwand, M. C., Xiao, T., & Zhang, M. (2018). Climate Impacts, Political Institutions, and Leader Survival: Effects of Droughts and Flooding Precipitation. Economics of Disasters and Climate Change, 1-21.

Alexander, M. A., Scott, J. D., Friedland, K. D., Mills, K. E., Nye, J. A., Pershing, A. J., & Thomas, A. C. (2018). Projected sea surface temperatures over the 21st century: Changes in the mean, variability and extremes for large marine ecosystem regions of Northern Oceans. Elem Sci Anth, 6(1), 9. DOI: http://doi.org/10.1525/elementa.191

Dasgupta, S., Choyke, S., Ferguson, P. L., & McElroy, A. E. (2018). Antioxidant responses and oxidative stress in sheepshead minnow larvae exposed to Corexit 9500® or its component surfactant, DOSS. Aquatic Toxicology, 194, 10-17.

Zhang, Y., Xie, S., Klein, S. A., Marchand, R., Kollias, P., Clothiaux, E. E., … & Tang, S. (2018). The ARM Cloud Radar Simulator for Global Climate Models: A New Tool for Bridging Field Data and Climate Models. Bulletin of the American Meteorological Society, (2017).

Knopf, D. A., Alpert, P. A., Wang, B., The Role of Organic Aerosol in Atmospheric Ice Nucleation: A Review. ACS Earth Space Chem., Article ASAP DOI: 10.1021/acsearthspacechem.7b00120.

Hattenrath-Lehmann, T. K., Lusty, M. W., Wallace, R. B., Haynes, B., Wang, Z., Broadwater, M., … Chytalo, K. & Gobler, C. J. (2018). Evaluation of Rapid, Early Warning Approaches to Track Shellfish Toxins Associated with Dinophysis and Alexandrium Blooms. Marine Drugs, 16(1), 28.

Zhou, X., Ackerman, A. S., Fridlind, A. M., & Kollias, P. (2018). Simulation of mesoscale cellular convection in marine stratocumulus. Part I: Drizzling conditions. Journal of the Atmospheric Sciences, (2017).

Flanagan, A. M., Flood, R. D., Frisk, M. G., Garza, C. D., Lopez, G. R., Maher, N. P. & Cerrato, R. M. (2018). The relationship between observational scale and explained variance in benthic communities. PLoS ONE, 13(1), e0189313.

Chen, J., Liu, Y., Zhang, M., & Peng, Y. (2018). Height Dependency of Aerosol‐Cloud Interaction Regimes. Journal of Geophysical Research: Atmospheres, 123(1), 491-506.

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Bowman, M. J., Yaro, R., & Golden, W. B. Regional Storm Surge Planning for Metro New York/New Jersey. In International Conference on Sustainable Infrastructure 2017 (pp. 336-347).

Liu, P., Zhu, Y., Zhang, Q., Gottschalck, J., Zhang, M., Melhauser, C., Li, W., Guan, H., Zhou, X., Hou, D. and Peña, M., (2017). Climatology of tracked persistent maxima of 500-hPa geopotential height. Climate Dynamics, pp.1-17.

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Kim, H. M., & Kim, B. M. (2017). Relative Contributions of Atmospheric Energy Transport and Sea Ice Loss to the Recent Warm Arctic Winter. Journal of Climate, 30(18), 7441-7450.

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Fan, J., Han, B., Varble, A., Morrison, H., North, K., Kollias, P., … & Lin, Y. (2017). Cloud‐resolving model intercomparison of an MC3E squall line case: Part I—Convective updrafts. Journal of Geophysical Research: Atmospheres, 122(17), 9351-9378.

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Hu, Z., Wang, D. P., He, X., Li, M., Wei, J., Pan, D., & Bai, Y. (2017). Episodic surface intrusions in the Yellow Sea during relaxation of northerly winds. Journal of Geophysical Research: Oceans.

Thomas, A. C., Pershing, A. J., Friedland, K. D., Nye, J. A., Mills, K. E., Alexander, M. A., … & Henderson, M. E. (2017). Seasonal trends and phenology shifts in sea surface temperature on the North American northeastern continental shelf. Elem Sci Anth, 5.

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McCartain, L. D., Townsend, M., Thrush, S. F., Wethey, D. S., Woodin, S. A., Volkenborn, N., & Pilditch, C. A. (2017). The effects of thin mud deposits on the behaviour of a deposit-feeding tellinid bivalve: implications for ecosystem functioning. Marine and Freshwater Behaviour and Physiology, 50(4), 239-255.

Wehrmann, L.M., Riedinger, N., Brunner, B., Kamyshny Jr., A., Hubert, C.R.J., Herbert, L.C., Brüchert, V., Jørgensen, B.B., Ferdelman, T.G., Formolo M.J., 2017. Iron-controlled oxidative sulfur cycling recorded in the distribution and isotopic composition of sulfur species in glacially influenced fjord sediments of west Svalbard. Chemical Geology 466, 678-695.

Mao, X., Waugh, S., Langlois, K., Collier, J.L., Price, R., Garvey, J., Gobler, C. and Walker, H., 2017. Nitrogen transformations and microbial characterization in passive nitrogen removing biofilters (NRBs) for onsite wastewater treatment. Proceedings of the Water Environment Federation, 2017(15), pp.898-906.

Bond, M. E., Valentin-Albanese, J., Babcock, E. A., Abercrombie, D., Lamb, N. F., Miranda, A., Pikitch, E.K. & Chapman, D. D. (2017). Abundance and size structure of a reef shark population within a marine reserve has remained stable for more than a decade. Marine Ecology Progress Series, 576, 1-10.

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Li, Y., & Zhang, M. (2017). The Role of Shallow Convection over the Tibetan Plateau. Journal of Climate, 30(15), 5791-5803.

Hattenrath-Lehmann, T. K., & Gobler, C. J. (2017). Identification of unique microbiomes associated with harmful algal blooms caused by Alexandrium fundyense and Dinophysis acuminata. Harmful Algae, 68, 17-30.

Bond, M. E., Valentin-Albanese, J., Babcock, E. A., Abercrombie, D., Lamb, N. F., Miranda, A., Pikitch, E.K. & Chapman, D. D. (2017). Abundance and size structure of a reef shark population within a marine reserve has remained stable for more than a decade. Marine Ecology Progress Series, 576, 1-10.

Kim, H. M. (2017). The impact of the mean moisture bias on the key physics of MJO propagation in the ECMWF reforecast. Journal of Geophysical Research: Atmospheres, 122(15), 7772-7784.

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Dheilly NM, Bolnick D, Bordenstein S, Brindley PJ, Figueres C, Holmes EC, Martinez Martinez J, Phillips AJ, Poulin R, Rosario K (2017). Parasite Microbiome Project: Systematic investigation of microbiome dynamics within and across parasite-host interactions mSystems 2(4)

McDowall, P., & Lynch, H. J. (2017). The importance of topographically corrected null models for analyzing ecological point processes. Ecology.

Madigan, D. J., Baumann, Z., Snodgrass, O. E., Dewar, H., Berman-Kowalewski, M., Weng, K. C., … & Fisher, N. S. (2017). Assessing Fukushima-derived radiocesium in migratory Pacific predators. Environmental Science & Technology, 51(16), 8962-8971.

Scott, R. C., Lubin, D., Vogelmann, A. M., & Kato, S. (2017). West Antarctic Ice Sheet cloud cover and surface radiation budget from NASA A-train satellites. Journal of Climate, 30(16), 6151-6170.

Rountos, K. J., Gobler, C. J., & Pikitch, E. K. (2017). Ontogenetic Differences in Swimming Behavior of Fish Exposed to the Harmful Dinoflagellate Cochlodinium polykrikoides. Transactions of the American Fisheries Society, 146(5), 1081-1091.

Zhou, X., Heus, T., & Kollias, P. (2017). Influences of Drizzle on Stratocumulus Cloudiness and Organization. Journal of Geophysical Research: Atmospheres.

Monastero, R. N., Karimi, R., Nyland, J. F., Harrington, J., Levine, K., & Meliker, J. R. (2017). Mercury exposure, serum antinuclear antibodies, and serum cytokine levels in the Long Island Study of Seafood Consumption: A cross-sectional study in NY, USA. Environmental Research, 156, 334-340.

Parishani, H., Pritchard, M. S., Bretherton, C. S., Wyant, M. C., & Khairoutdinov, M. (2017). Toward low cloud‐permitting cloud superparameterization with explicit boundary layer turbulence. Journal of Advances in Modeling Earth Systems.

Henderson, M. E., Mills, K. E., Thomas, A. C., Pershing, A. J., & Nye, J. A. Effects of spring onset and summer duration on fish species distribution and biomass along the Northeast United States continental shelf. Reviews in Fish Biology and Fisheries, 1-14.

Kang, Y., Kudela, R. M., & Gobler, C. J. Quantifying nitrogen assimilation rates of individual phytoplankton species and plankton groups during harmful algal blooms via sorting flow cytometry. Limnology and Oceanography: Methods.

Tridon, F., Battaglia, A., Luke, E., & Kollias, P. (2017). Rain retrieval from dual‐frequency radar Doppler spectra: validation and potential for a midlatitude precipitating case‐study. Quarterly Journal of the Royal Meteorological Society, 143(704), 1364-1380.

Taylor, D. (2017) Palm Up, Palm Down. San Antonio, TX: Wings Press.

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Nicolas, J. P., Vogelmann, A. M., Scott, R. C., Wilson, A. B., Cadeddu, M. P., Bromwich, D. H., … & Powers, H. H. (2017). January 2016 extensive summer melt in West Antarctica favoured by strong El Niño. Nature communications, 8, ncomms15799.

Melnychuk, M. C., Dunton, K. J., Jordaan, A., McKown, K. A., & Frisk, M. G. (2017). Informing conservation strategies for the endangered Atlantic sturgeon using acoustic telemetry and multi‐state mark–recapture models. Journal of Applied Ecology, 54(3), 914-925.

Miller, C., Karimi, R., Zhang, Q., Yang, J., & Meliker, J. (2017). Mercury, eicosapentanoic acid and docosahexaenoic acid demonstrate limited effect on plasma paraoxonase-1 activity and blood pressure among avid seafood consumers in the Long Island Study of Seafood Consumption, NY, USA. International journal of hygiene and environmental health, 220(2), 373-377.

Isaacman-VanWertz, G., Massoli, P., O’Brien, R.E., Nowak, J.B., Canagaratna, M.R., Jayne, J.T., Worsnop, D.R., Su, L., Knopf, D.A., Misztal, P.K. and Arata, C., (2017). Using advanced mass spectrometry techniques to fully characterize atmospheric organic carbon: current capabilities and remaining gaps. Faraday Discussions.

Acquistapace, C., Kneifel, S., Löhnert, U., Kollias, P., Maahn, M., & Bauer-Pfundstein, M. (2017). Optimizing observations of drizzle onset with millimeter-wavelength radars. Atmospheric Measurement Techniques, 10(5), 1783-1802.

Chen, J., Pycke, B. F., Brownawell, B. J., Kinney, C. A., Furlong, E. T., Kolpin, D. W., & Halden, R. U. (2017). Occurrence, temporal variation, and estrogenic burden of five parabens in sewage sludge collected across the United States. Science of The Total Environment, 593, 368-374.

Rosen, B. H., Davis, T. W., Gobler, C. J., Kramer, B. J., & Loftin, K. A. (2017). Cyanobacteria of the 2016 Lake Okeechobee and Okeechobee Waterway harmful algal bloom (No. 2017-1054). US Geological Survey.

Price, R.E., and Giovannelli, D. 2017. A Review of the Geochemistry and Microbiology of Marine Shallow-Water Hydrothermal Vents, Reference Module in Earth Systems and Environmental Sciences, Elsevier, 2017. 30-May-17. doi: 10.1016/B978-0-12-409548-9.09523-3.

Yang, K., Davidson, R. A., Nozick, L. K., Blanton, B., & Colle, B. (2017). Scenario-Based Hazard Trees for Depicting Resolution of Hurricane Uncertainty over Time. Natural Hazards Review, 18(3), 04017001.

Brzezinski, M. A., Krause, J. W., Baines, S. B., Collier, J. L., & Ohnemus, D. C. (2017). Patterns and regulation of silicon accumulation in Synechococcus spp. Journal of Phycology.

Farhadzadeh, A. (2017). A study of Lake Erie seiche and low frequency water level fluctuations in the presence of surface ice. Ocean Engineering, 135, 117-136.

Rider, T. (2017). Review of Between Stony Brook Harbor Tides: The Natural History of a Long Island Pocket Bay by R. Lawrence Swanson and Malcolm J. Bowman. Long Island History Journal, Vol 26-1

Swanson, R. L., Wilson, R., Brownawell, B., & Willig, K. (2017). Environmental consequences of the flooding of the Bay Park Sewage Treatment Plant during Superstorm Sandy. Marine Pollution Bulletin.

Lee, C. S., & Fisher, N. S. (2017). Bioaccumulation of methylmercury in a marine copepod. Environmental toxicology and chemistry, 36(5), 1287-1293.

Mahmoudi, N., Beaupré, S. R., Steen, A. D., & Pearson, A. (2017). Sequential bioavailability of sedimentary organic matter to heterotrophic bacteria. Environmental Microbiology.

Narenpitak, P., Bretherton, C. S., & Khairoutdinov, M. F. (2017). Cloud and circulation feedbacks in a near‐global aquaplanet cloud‐resolving model. Journal of Advances in Modeling Earth Systems.

Krause, J. W., Brzezinski, M. A., Baines, S. B., Collier, J. L., Twining, B. S., & Ohnemus, D. C. (2017). Picoplankton contribution to biogenic silica stocks and production rates in the Sargasso Sea. Global Biogeochemical Cycles.

Jackson, L. J., Furman, B. T., & Peterson, B. J. (2017). Morphological response of Zostera marina reproductive shoots to fertilized porewater. Journal of Experimental Marine Biology and Ecology, 489, 1-6.

Aller, J. Y., Radway, J. C., Kilthau, W. P., Bothe, D. W., Wilson, T. W., Vaillancourt, R. D., … & Knopf, D. A. (2017). Size-resolved characterization of the polysaccharidic and proteinaceous components of sea spray aerosol. Atmospheric Environment, 154, 331-347.

Gobler, C. J., Doherty, O. M., Hattenrath-Lehmann, T. K., Griffith, A. W., Kang, Y., & Litaker, R. W. (2017). Ocean warming since 1982 has expanded the niche of toxic algal blooms in the North Atlantic and North Pacific oceans. Proceedings of the National Academy of Sciences, 201619575. doi:10.1073/pnas.1619575114

Farhadzadeh, A., Hashemi, M. R., & Neill, S. (2017). Characterizing the Great Lakes Hydrokinetic Renewable Energy Resource: Lake Erie Wave, Surge and Seiche Characteristics. Energy.

Suter, E. A., Scranton, M. I., Chow, S., Stinton, D., Medina Faull, L., & Taylor, G. T. (2017). Niskin bottle sample collection aliases microbial community composition and biogeochemical interpretation. Limnology and Oceanography, 62(2), 606-617.

Humphries, G. R. W., Naveen, R., Schwaller, M., Che-Castaldo, C., McDowall, P., Schrimpf, M., & Lynch, H. J. (2017). Mapping Application for Penguin Populations and Projected Dynamics (MAPPPD): data and tools for dynamic management and decision support. Polar Record, 1-7.

Zheng, M., Chang, E.K., Colle, B.A., Luo, Y. and Zhu, Y., 2017. Applying Fuzzy Clustering to a Multimodel Ensemble for US East Coast Winter Storms: Scenario Identification and Forecast Verification. Weather and Forecasting, 32(3), pp.881-903.

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Baumann, Z., Mason, R.P., Conover, D.O., Balcom, P., Chen, C.Y., Buckman, K.L., Fisher, N.S. and Baumann, H., 2016. Mercury bioaccumulation increases with latitude in a coastal marine fish (Atlantic silverside, Menidia menidia). Canadian Journal of Fisheries and Aquatic Sciences, (999), pp.1-7.

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Rodriguez-Mora, M. J., Edgcomb, V. P., Taylor, C., Scranton, M. I., Taylor, G. T., & Chistoserdov, A. Y. (2016). The diversity of sulfide oxidation and sulfate reduction genes expressed by the bacterial communities of the Cariaco Basin, Venezuela. The open microbiology journal, 10, 140.

Patton, E. G., Guenther, A. B., Shepson, P. B., Miller, D. O., Brune, W. H., Misztal, P. K., … & Mak, J. E. (2016). Understanding isoprene photooxidation using observations and modeling over a subtropical forest in the southeastern US. Atmospheric Chemistry and Physics, 16(12), 7725.

Sagarese, S. R., Frisk, M. G., Cerrato, R. M., Sosebee, K. A., Musick, J. A., & Rago, P. J. (2016). Diel Variations in Survey Catch Rates and Survey Catchability of Spiny Dogfish and their Pelagic Prey in the Northeast US Continental Shelf Large Marine Ecosystem. Marine and Coastal Fisheries, 8(1), 244-262.

Bacmeister, J. T., Reed, K. A., Hannay, C., Lawrence, P., Bates, S., Truesdale, J. E., … & Levy, M. (2016). Projected changes in tropical cyclone activity under future warming scenarios using a high-resolution climate model. Climatic Change, 1-14.

Swanson, R. L., Lwiza, K., Willig, K., & Morris, K. (2016). Superstorm Sandy marine debris wash-ups on Long Island—What happened to them?. Marine pollution bulletin.

Breece, M. W., Fox, D. A., Dunton, K. J., Frisk, M. G., Jordaan, A., & Oliver, M. J. (2016). Dynamic seascapes predict the marine occurrence of an endangered species: Atlantic Sturgeon Acipenser oxyrinchus oxyrinchus. Methods in Ecology and Evolution.

Wehrmann, L.M. and Riedinger, N., 2016. The Sedimentary Deep Subseafloor Biosphere, Reference Module in Earth Systems and Environmental Sciences. Elsevier. http://dx.doi.org/10.1016/B978-0-12-409548-9.09741-4

Hu, Z., Wang, D. P., Pan, D., He, X., Miyazawa, Y., Bai, Y., … & Gong, F. (2016). Mapping surface tidal currents and Changjiang plume in the East China Sea from Geostationary Ocean Color Imager. Journal of Geophysical Research: Oceans.

Hall, D. M., Ullrich, P. A., Reed, K. A., Jablonowski, C., Nair, R. D., & Tufo, H. M. (2016). Dynamical Core Model Intercomparison Project (DCMIP) tracer transport test results for CAM‐SE. Quarterly Journal of the Royal Meteorological Society, 142(697), 1672-1684.

Urmy, S. S., Williamson, C. E., Leach, T. H., Schladow, S. G., Overholt, E. P., & Warren, J. D. (2016). Vertical redistribution of zooplankton in an oligotrophic lake associated with reduction in ultraviolet radiation by wildfire smoke. Geophysical Research Letters, 43(8), 3746-3753.

Karimi, R., Chen, C. Y., & Folt, C. L. (2016). Comparing nearshore benthic and pelagic prey as mercury sources to lake fish: the importance of prey quality and mercury content. Science of The Total Environment, 565, 211-221.

Rahman, S., Aller, R. C., & Cochran, J. K. (2016). Cosmogenic 32Si reveals biogenic silica burial in deltas rivals the Southern Ocean siliceous ooze. Geophysical Research Letters, 43, 7124-7142.

Zhang, M., Somerville, R. C., & Xie, S. (2016). The SCM concept and creation of ARM forcing datasets. Meteorological Monographs, 57, 24-1.

Madigan, D.J., Chiang, W.C., Wallsgrove, N.J., Popp, B.N., Kitagawa, T., Choy, C.A., Tallmon, J., Ahmed, N., Fisher, N.S. and Sun, C.L., (2016). Intrinsic tracers reveal recent foraging ecology of giant Pacific bluefin tuna at their primary spawning grounds. Marine Ecology Progress Series, 553, pp.253-266.

Swanson, L., Dorsch, M., Giampieri, M., Orton, P., Parris, A. S., & Sanderson, E. W. (2016). Dynamics of the Biophysical Systems of Jamaica Bay. In Prospects for Resilience (pp. 65-89). Island Press/Center for Resource Economics.

Harke, M. J., Steffen, M. M., Gobler, C. J., Otten, T. G., Wilhelm, S. W., Wood, S. A., & Paerl, H. W. (2016). A review of the global ecology, genomics, and biogeography of the toxic cyanobacterium, Microcystis spp. Harmful Algae, 54, 4-20.

Davis, T. W., & Gobler, C. J. (2016). Preface for Special Issue on “Global expansion of harmful cyanobacterial blooms: Diversity, ecology, causes, and controls”. Harmful Algae, 54, 1-3.

Gobler, C. J., Burkholder, J. M., Davis, T. W., Harke, M. J., Johengen, T., Stow, C. A., & Van de Waal, D. B. (2016). The dual role of nitrogen supply in controlling the growth and toxicity of cyanobacterial blooms. Harmful Algae, 54, 87-97.

Wang, L., Han, J., Sundahl, B., Thornton, S., Zhu, Y., Zhou, R., Jaye, C., Liu, H., Li, Z.Q., Taylor, G.T. and Fischer, D.A., 2016. Ligand-induced dependence of charge transfer in nanotube–quantum dot heterostructures. Nanoscale, 8(34), pp.15553-15570.

Thorne, L. H., Conners, M. G., Hazen, E. L., Bograd, S. J., Antolos, M., Costa, D. P., & Shaffer, S. A. (2016). Effects of El Niño-driven changes in wind patterns on North Pacific albatrosses. Journal of The Royal Society Interface, 13(119), 20160196.

Zarzycki, C. M., Reed, K. A., Bacmeister, J. T., Craig, A. P., Bates, S. C., & Rosenbloom, N. A. (2016). Impact of surface coupling grids on tropical cyclone extremes in high-resolution atmospheric simulations. Geoscientific Model Development, 9(2), 779-788.

Smirnov, O., Zhang, M., Xiao, T., Orbell, J., Lobben, A., & Gordon, J. (2016). The relative importance of climate change and population growth for exposure to future extreme droughts. Climatic Change, 138(1-2), 41-53.

Kalesse, H., Szyrmer, W., Kneifel, S., Kollias, P., & Luke, E. (2016). Fingerprints of a riming event on cloud radar Doppler spectra: observations and modeling. Atmospheric Chemistry and Physics, 16(5), 2997-3012.

Bender, N. A., Crosbie, K., & Lynch, H. J. (2016). Patterns of tourism in the Antarctic Peninsula region: a 20-year analysis. Antarctic Science, 28(03), 194-203.

Kim, H. M., Kim, D., Vitart, F., Toma, V. E., Kug, J. S., & Webster, P. J. (2016). MJO Propagation across the Maritime Continent in the ECMWF Ensemble Prediction System. Journal of Climate, 29(11), 3973-3988.

Laskin, A., Gilles, M. K., Knopf, D. A., Wang, B., & China, S. (2016). Progress in the analysis of complex atmospheric particles. Annual Review of Analytical Chemistry, 9, 117-143.

Bony, S., Stevens, B., Coppin, D., Becker, T., Reed, K. A., Voigt, A., & Medeiros, B. (2016). Thermodynamic control of anvil cloud amount. Proceedings of the National Academy of Sciences, 201601472.

Chen, C. Y., Ward, D. M., Williams, J. J., & Fisher, N. S. (2016). Metal bioaccumulation by estuarine food webs in New England, USA. Journal of marine science and engineering, 4(2), 41.

Gilbert, F., Hulth, S., Grossi, V., & Aller, R. C. (2016). Redox oscillation and benthic nitrogen mineralization within burrowed sediments: An experimental simulation at low frequency. Journal of Experimental Marine Biology and Ecology, 482, 75-84.

Woodin, S. A., Volkenborn, N., Pilditch, C. A., Lohrer, A. M., Wethey, D. S., Hewitt, J. E., & Thrush, S. F. (2016). Same pattern, different mechanism: Locking onto the role of key species in seafloor ecosystem process. Scientific Reports, 6, 26678.

Kawano, M., Uno, S., Koyama, J., Kokushi, E., & McElroy, A. (2016). Effects of oxygenated polycyclic aromatic hydrocarbons on the early life stages of Japanese medaka. Environmental Science and Pollution Research, 1-8.

Wang, W.-L., Armstrong, R. A., Cochran, J. K., and Heilbrun, C. (2016) 230Th and 234Th as coupled tracers of particle cycling in the ocean: A maximum likelihood approach., Deep Sea Research Part I: Oceanographic Research Papers, 111, 61-70., http://dx.doi.org/10.1016/j.dsr.2016.02.003.

Warren, J. D., Leach, T. H., & Williamson, C. E. (2016). Measuring the distribution, abundance, and biovolume of zooplankton in an oligotrophic freshwater lake with a 710 kHz scientific echosounder. Limnology and Oceanography: Methods.

Landman, N. H., Kruta, I., Denton, J. S., & Cochran, J. K. (2016). Getting unhooked: comment on the hypothesis that heteromorph ammonites were attached to kelp branches on the sea floor, as proposed by. Journal of Molluscan Studies, 82(2), 351-355

Pershing, A.J., Alexander, M.A., Hernandez, C.M., Kerr, L.A., Le Bris, A., Mills, K.E., Nye, J.A., Record, N.R., Scannell, H.A., Scott, J.D. and Sherwood, G.D., 2016. Response to Comments on “Slow adaptation in the face of rapid warming leads to collapse of the Gulf of Maine cod fishery”. Science, 352(6284), pp.423-423.

Shackell, N. L., Frank, K. T., Nye, J. A., & den Heyer, C. E. (2016). A transboundary dilemma: dichotomous designations of Atlantic halibut status in the Northwest Atlantic. ICES Journal of Marine Science: Journal du Conseil, fsw042.

Gobler, C. J., & Baumann, H. (2016). Hypoxia and acidification in ocean ecosystems: coupled dynamics and effects on marine life. Biology Letters, 12(5), 20150976.

Young, C. S., & Gobler, C. J. (2016). Ocean Acidification Accelerates the Growth of Two Bloom-Forming Macroalgae. PloS one, 11(5), e0155152.

Druffel, E. R. M., Beaupré, S. R., & Ziolkowski, L. A. (2016). Radiocarbon in the Oceans. In Radiocarbon and Climate Change (pp. 139-166). Springer International Publishing.

Chapperon, C., Volkenborn, N., Clavier, J., Séité, S., Seabra, R., & Lima, F. P. (2016). Exposure to solar radiation drives organismal vulnerability to climate: Evidence from an intertidal limpet. Journal of Thermal Biology, 57, 92-100.

Trumbore, S. E., Xu, X., Santos, G. M., Czimczik, C. I., Beaupré, S. R., Pack, M. A., … & Ziolkowski, L. (2016). Preparation for radiocarbon analysis. In Radiocarbon and Climate Change (pp. 279-315). Springer International Publishing.

Wehrmann, L. M., Ockert, C., Mix, A. C., Gussone, N., Teichert, B. M. A., & Meister, P. (2016). Repeated occurrences of methanogenic zones, diagenetic dolomite formation and linked silicate alteration in southern Bering Sea sediments (Bowers Ridge, IODP Exp. 323 Site U1341). Deep Sea Research Part II: Topical Studies in Oceanography, 125, 117-132.

Moore, M.J, McElroy, A.E. Geoghegan, P., Siskey, M.R. and Pembroke, A.E. 2016. Founder Monitoring Report: 2015 Results. Boston:Massachusetts Water Resources Authority. Report 2016-05. 40 pp.

Pandey, R., Usui, K., Livingstone, R. A., Fischer, S. A., Pfaendtner, J., Backus, E. H., Knopf, D.A. … & Scheel, J. F. (2016). Ice-nucleating bacteria control the order and dynamics of interfacial water. Science Advances, 2(4), e1501630.

Chen, J., Liu, Y., Zhang, M., & Peng, Y. (2016). New Understanding and Quantification of the Regime Dependence of Aerosol‐Cloud Interaction for Studying Aerosol Indirect Effects. Geophysical Research Letters.

Martinez, C. M., Rohlf, F. J., & Frisk, M. G. (2016). Sexual dimorphism in sister species of Leucoraja skate and its relationship to reproductive strategy and life history. Evolution & Development.

Cahill, A. E., & Levinton, J. S. (2016). Genetic differentiation and reduced genetic diversity at the northern range edge of two species with different dispersal modes. Molecular ecology, 25(2), 515-526.

Soulet, G., Skinner, L. C., Beaupré, S. R., & Galy, V. (2016). A Note on Reporting of Reservoir 14 C Disequilibria and Age Offsets. Radiocarbon, 58(1), 205-211.

Baines, S. B., Chen, X., Vogt, S., Fisher, N. S., Twining, B. S., & Landry, M. R. (2016). Microplankton trace element contents: implications for mineral limitation of mesozooplankton in an HNLC area. Journal of Plankton Research, fbv109.

Trammell, J. H., Jiang, X., Li, L., Kao, A., Zhang, G. J., Chang, E. K., & Yung, Y. (2016). Temporal and Spatial Variability of Precipitation from Observations and Models*. Journal of Climate, 29(7), 2543-2555.

Bluestein, H. B., French, M. M., Snyder, J. C., & Houser, J. B. (2016). Doppler Radar Observations of Anticyclonic Tornadoes in Cyclonically Rotating, Right-Moving Supercells. Monthly Weather Review, 144(4), 1591-1616.

Fisher, S. C., Phillips, P. J., Brownawell, B. J., & Browne, J. P. (2016). Comparison of wastewater-associated contaminants in the bed sediment of Hempstead Bay, New York, before and after Hurricane Sandy. Marine Pollution Bulletin.

Levy, H., Clucas, G.V., Rogers, A.D., Leaché, A.D., Ciborowski, K.L., Polito, M.J., Lynch, H.J., Dunn, M.J. and Hart, T., (2016). Population structure and phylogeography of the Gentoo Penguin (Pygoscelis papua) across the Scotia Arc. Ecology and evolution.

Griffith, A. W., & Gobler, C. J. (2016). Temperature controls the toxicity of the ichthyotoxic dinoflagellate Cochlodinium polykrikoides. MEPS, 545, 63-76.

Reed, K. A., & Medeiros, B. (2016). A reduced complexity framework to bridge the gap between AGCMs and cloud‐resolving models. Geophysical Research Letters.

Pascal, L., Maire, O., Volkenborn, N., Lecroart, P., Bichon, S., de Montaudouin, X., … & Deflandre, B. (2016). Influence of the mud shrimp Upogebia pusilla (Decapoda: Gebiidea) on solute and porewater exchanges in an intertidal seagrass (Zostera noltei) meadow of Arcachon Bay: An experimental assessment. Journal of Experimental Marine Biology and Ecology, 477, 69-79.

Sanchez-Franks, A., Hameed, S., & Wilson, R. E. (2015). The Icelandic Low as a Predictor of the Gulf Stream Northwall Position. Journal of Physical Oceanography, (2015).

Allam, B., & Espinosa, E. P. (2016). Bivalve immunity and response to infections: Are we looking at the right place?. Fish & Shellfish Immunology.

Moniruzzaman, M., Gann, E. R., LeCleir, G. R., Kang, Y., Gobler, C. J., & Wilhelm, S. W. (2016). Diversity and dynamics of algal Megaviridae members during a harmful brown tide caused by the pelagophyte, Aureococcus anophagefferens. FEMS Microbiology Ecology, fiw058.

Chapperon, C., Volkenborn, N., Clavier, J., Séité, S., Seabra, R., & Lima, F. P. (2016). Exposure to solar radiation drives organismal vulnerability to climate: Evidence from an intertidal limpet. Journal of Thermal Biology, 57, 92-100.

Witharana, C., LaRue, M. A., & Lynch, H. J. (2016). Benchmarking of data fusion algorithms in support of earth observation based Antarctic wildlife monitoring. ISPRS Journal of Photogrammetry and Remote Sensing, 113, 124-143.

Karimi, R., Vacchi-Suzzi, C., & Meliker, J. R. (2016). Mercury exposure and a shift toward oxidative stress in avid seafood consumers. Environmental research, 146, 100-107.

Chang, E. K., Ma, C. G., Zheng, C., & Yau, A. M. (2016). Observed and projected decrease in Northern Hemisphere extratropical cyclone activity in summer and its impacts on maximum temperature. Geophysical Research Letters, 43(5), 2200-2208.

Wang, K., del Castillo, C., Corre, E., Espinosa, E. P., & Allam, B. (2016). Clam focal and systemic immune responses to QPX infection revealed by RNA-seq technology. BMC genomics, 17(1), 1.

Choi, J., Son, S. W., Ham, Y. G., Lee, J. Y., & Kim, H. M. (2016). Seasonal-to-interannual prediction skills of near-surface air temperature in the CMIP5 decadal hindcast experiments. Journal of Climate, (2016).

Giner, J. L., Ceballos, H., Tang, Y. Z., & Gobler, C. J. (2016). Sterols and Fatty Acids of the Harmful Dinoflagellate Cochlodinium polykrikoides. Chemistry & biodiversity, 13(2), 249-252.

O’Leary, S. J., Martinez, C. M., Baumann, H., Abercrombie, D. L., Poulakis, G. R., Murray, C. H., … & Chapman, D. D. (2016). Population genetics and geometric morphometrics of the key silverside, Menidia conchorum, a marine fish in a highly-fragmented, inland habitat. Bulletin of Marine Science.

Espinosa, E. P., Cerrato, R. M., Wikfors, G. H., & Allam, B. (2016). Modeling food choice in the two suspension-feeding bivalves, Crassostrea virginica and Mytilus edulis. Marine Biology, 163(2), 1-13.

Ladino, L.A., Yakobi-Hancock, J.D., Kilthau, W.P., Mason, R.H., Si, M., Li, J., Miller, L.A., Schiller, C.L., Huffman, J.A., Aller, J.Y. and Knopf, D.A., 2016. Addressing the ice nucleating abilities of marine aerosol: A combination of deposition mode laboratory and field measurements. Atmospheric Environment.

Volkenborn N., Woodin S.A., Wethey D.S., Polerecky L. (2016) Bioirrigation in marine sediments. Reference Module in Earth Systems and Environmental Sciences. DOI: 10.1016/B978-0-12-409548-9.09525-7

Cahill, A. E., & Levinton, J. S. (2016). Genetic differentiation and reduced genetic diversity at the northern range edge of two species with different dispersal modes. Molecular ecology, 25(2), 515-526.

Pinaud, S., Portela, J., Duval, D., Nowacki, F.C., Olive, M.A., Allienne, J.F., Galinier, R., Dheilly, N.M., Kieffer-Jaquinod, S., Mitta, G. and Théron, A., 2016. A Shift from Cellular to Humoral Responses Contributes to Innate Immune Memory in the Vector Snail Biomphalaria glabrata. PLoS Pathog, 12(1), p.e1005361.

Hattenrath-Lehmann, T. K., Zhen, Y., Wallace, R. B., Tang, Y. Z., & Gobler, C. J. (2016). Mapping the distribution of cysts from the toxic dinoflagellate, Cochlodinium polykrikoides, in bloom-prone estuaries using a novel fluorescence in situ hybridization assay. Applied and environmental microbiology, 82 (4):1114-1125; 10.1128/AEM.03457-15 FEB 2016

Liu, P., Zhang, Q., Zhang, C., Zhu, Y., Khairoutdinov, M., Kim, H. M., … & Zhang, M. (2016). A Revised Real-Time Multivariate MJO Index. Monthly Weather Review, 144 (2):627-642; 10.1175/MWR-D-15-0237.1 FEB 2016

Li, Y., & Zhang, M. (2016). Cumulus over the Tibetan Plateau in the Summer Based on CloudSat-CALIPSO Data. Journal of Climate, 29 (3):1219-1230; 10.1175/JCLI-D-15-0492.1 FEB 2016.

Chapman, D. D., Feldheim, K.A., Papastamatiou, Y., Hueter, R.H. There and Back Again: A review of residency and return migrations in sharks, with implications for population structure and management. Annual Reviews in Marine Science (Available online in advance of publication).

Ashe, J., Feldheim, K.A., Fields, A., Brooks, E.J., Skomal, G., Gruber, S.H., Chapman, D. D. (In Press). Local population structure and context-dependent isolation by distance in a large coastal shark. Marine Ecology Progress Series.

Kessel, S.T., Chapman, D. D., Franks, B. R., Gedamke, T., Gruber, S. H., Newman, M.J., White, E. R., Perkins, R. G. (In Press). Predictable temperature regulated residency, movement and migration in a large, highly-mobile marine predator. Marine Ecology Progress Series.

Alpert, P. A. & Knopf, D. A. (2016). Analysis of isothermal and cooling-rate-dependent immersion freezing by a unifying stochastic ice nucleation model, Atmospheric Chemistry and Physics 16 (4), 2083-2107

Stubler, A. D., A. K. Stevens and B. J. Peterson. 2016. Using community-wide recruitment and succession patterns to assess sediment stress on Jamaican coral reefs. Journal of Experimental Marine Biology and Ecology 474: 29-38.

Giner, J. L., Ceballos, H., Tang, Y. Z., & Gobler, C. J. (2016). Sterols and Fatty Acids of the Harmful Dinoflagellate Cochlodinium polykrikoides. Chemistry & Biodiversity, 13(2), 249-252.

Espinosa, E. P., Koller, A., & Allam, B. (2016). Proteomic characterization of mucosal secretions in the eastern oyster, Crassostrea virginica. Journal of proteomics, 132, 63-76. DOI information: 10.1016/j.jprot.2015.11.018

Baines, S.B., X. Chen, S. Vogt, N.S. Fisher, B.S. Twining, and M.R. Landry. In press. Elemental content of single-celled plankton in the Costa Rica Upwelling Dome and mineral limitation of mesozooplankton. Journal of Plankton Research

Baines, S.B., X. Chen, B.S. Twining, N.S. Fisher, and M.R. Landry. In press. Factors affecting Fe and Zn contents of mesozooplankton from the Costa Rica Dome. Journal of Plankton Research

Martinez, C.M., F.J. Rohlf and M.G. Frisk (In Press). Sexual dimorphism in sister species of Leucoraja skate and its relationship to reproductive strategy and life history. Evolution & Development.

Li, H., & Colle, B. A. 2015: Future Changes in Convective Storm Days over the Northeastern United States Using Linear Discriminant Analysis Applied to CMIP5 Predictions. J. Climate. doi: http://dx.doi.org/10.1175/JCLI-D-14-00831.1.

Colle, B. A., Sienkiewicz, M. J., Archer, C., Veron, D., Veron, F., Kempton, W., & Mak, J. E. (2016). Improving the mapping and prediction of offshore wind resources (IMPOWR): Experimental overview and first results. Bulletin of the American Meteorological Society, 97(8), 1377-1390.

Pascal, L., Maire, O., Volkenborn, N., Lecroart, P., Bichon, S., de Montaudouin, X., … & Deflandre, B. (2016). Influence of the mud shrimp Upogebia pusilla (Decapoda: Gebiidea) on solute and porewater exchanges in an intertidal seagrass (Zostera noltei) meadow of Arcachon Bay: An experimental assessment. Journal of Experimental Marine Biology and Ecology, 477, 69-79.

Dunton, K. J., Jordaan, A., Secor, D. H., Martinez, C. M., Kehler, T., Hattala, K. A., … & Frisk, M. G. (2016). Age and Growth of Atlantic Sturgeon in the New York Bight. North American Journal of Fisheries Management, 36(1), 62-73.

Trammell, J. H., Jiang, X., Li, L., Kao, A., Zhang, G. J., Chang, E. K., & Yung, Y. (2016). Temporal and Spatial Variability of Precipitation from Observation and Model. Journal of Climate, (2016).

Espinosa, E. P., Cerrato, R. M., Wikfors, G. H., & Allam, B. (2016). Modeling food choice in the two suspension-feeding bivalves, Crassostrea virginica and Mytilus edulis. Marine Biology, 163(2), 1-13.

Martinez, C. M., Rohlf, F. J., & Frisk, M. G. (2016). Re‐evaluation of batoid pectoral morphology reveals novel patterns of diversity among major lineages. Journal of morphology, 277(4), 482-493.

Erickson, M. J., Charney, J. J., & Colle, B. A. (2015). Development of a Fire Weather Index Using Meteorological Observations within the Northeast United States. Journal of Applied Meteorology and Climatology, (2015).

Cuesta, F., Muriel, P., Llambi, L.D., Halloy, S., Aguirre, N., Beck, S., Carilla, J., Menses, R.I., Cuello, S., Grau, A., Gamez, L., Irazabel, J., Jacome, J., Jaramillo, R., Ramirez, L., Samaniego, N., Suarez-Duque, D., Thompson, N., Tupuachi, A., Viñas, P., Yager, K., Becerra, M., Pauli, H., Gosling, W. (2016) Latitudinal and altitudinal patterns of plant community diversity on mountain summits across the tropical Andes. Ecography

Wang, X. H., Wang, D. P., Sun, Z., He, Z., Liu, H., Guan, W., … & Bao, X. (2016). International scientists discuss impact on China’s estuarine and coastal environment by intensive anthropogenic activities–The 2nd workshop on sediment dynamics of muddy coasts and estuaries: Physics, biology and their interactions, Zhoushan, China, 23–26 October, 2015. Estuarine, Coastal and Shelf Science, 168, ii-iii.

Espinosa, E. P., Koller, A., & Allam, B. (2016). Proteomic characterization of mucosal secretions in the eastern oyster, Crassostrea virginica. Journal of proteomics, 132, 63-76.

Wang, K., Espinosa, E. P., Tanguy, A., & Allam, B. (2016). Alterations of the immune transcriptome in resistant and susceptible hard clams (Mercenaria mercenaria) in response to Quahog Parasite Unknown (QPX) and temperature. Fish & shellfish immunology, 49, 163-176.

Stubler, A. D., Stevens, A. K., & Peterson, B. J. (2016). Using community-wide recruitment and succession patterns to assess sediment stress on Jamaican coral reefs. Journal of Experimental Marine Biology and Ecology,474, 29-38.

Martinez, C. M., Rohlf, F. J. and Frisk, M. G. (2016), Sexual dimorphism in sister species of Leucoraja skate and its relationship to reproductive strategy and life history. Evolution & Development. doi: 10.1111/ede.12175

Pochron, S. (2016) Monkeys In The Garden Irven DeVore and the Revolution in the Science of Social Behavior. Smashwords.

Pochron, S. (2016) Monkeys In The Garden Irven DeVore and the Revolution in the Science of Social Behavior. Smashwords.

Rider, Tara. The Once and Future Queen: The Imagining and Reimagining of Ireland. 2016. New Trails and Beaten Paths in Celtic Studies.

Tang, S., Zhang, M., & Xie, S. (2016). An ensemble constrained variational analysis of atmospheric forcing data and its application to evaluate clouds in CAM5. Journal of Geophysical Research: Atmospheres, 121(1), 33-48.

Yee, A. K., & Padilla, D. K. (2015). Allometric Scaling of the Radula in the Atlantic Slippersnail Crepidula fornicata. Journal of Shellfish Research, 34(3), 903-907.

Bretherton, C. S., & Khairoutdinov, M. F. (2015). Convective self‐aggregation feedbacks in near‐global cloud‐resolving simulations of an aquaplanet. Journal of Advances in Modeling Earth Systems.

Supinie, T. A., Jung, Y., Xue, M., Stensrud, D. J., French, M. M., & Bluestein, H. B. (2015). Impact of VORTEX2 Observations on Analyses and Forecasts of the 5 June 2009 Goshen County, Wyoming, Supercell. Monthly Weather Review, (2015).

Bokuniewicz, H., Cochran, J. K., Garcia-Orellana, J., Rodellas, V., Daniel, J. W., & Heilbrun, C. (2015). Intertidal percolation through beach sands as a source of 224,223 Ra to Long Island Sound, New York, and Connecticut, United States. Journal of Marine Research, 73(5), 123-140.

Baumann, H., Wells, R. J. D., Rooker, J. R., Zhang, S., Baumann, Z., Madigan, D. J., … & Fisher, N. S. (2015). Combining otolith microstructure and trace elemental analyses to infer the arrival of juvenile Pacific bluefin tuna in the California current ecosystem. ICES Journal of Marine Science: Journal du Conseil, 72(7), 2128-2138.

Allam, B., and Raftos, D., Immune responses to infectious diseases in bivalves, Journal of Invertebrate Pathology 131: 121-136, ISSN 0022-2011,http://dx.doi.org/10.1016/j.jip.2015.05.005.

Allam, B., & Espinosa, P. E. (2015, April). The multiple, central, roles of mucosal secretions in marine bivalves. In INTEGRATIVE AND COMPARATIVE BIOLOGY (Vol. 55, pp. E4-E4). JOURNALS DEPT, 2001 EVANS RD, CARY, NC 27513 USA: OXFORD UNIV PRESS INC.

McCann, M. J., & Padilla, D. K. (2015). Effects of a patchy food environment across life history stages. Journal of Experimental Marine Biology and Ecology, 472, 135-141.

Alpert, P. A., & Knopf, D. A. (2015). Analysis of isothermal and cooling rate dependent immersion freezing by a unifying stochastic ice nucleation model. Atmospheric Chemistry and Physics Discussions, 15(9), 13109-13166.

Fritts, D. C., Wang, L., Geller, M. A., Lawrence, D. A., Werne, J., & Balsley, B. B. (2015). Numerical Modeling of Multi-Scale Dynamics at a High Reynolds Number: Instabilities, Turbulence, and an Assessment of Ozmidov and Thorpe Scales. Journal of the Atmospheric Sciences, (2015).

Baines, S. B., Chen, X., Twining, B. S., Fisher, N. S., & Landry, M. R. (2015). Factors affecting Fe and Zn contents of mesozooplankton from the Costa Rica Dome. Journal of Plankton Research, fbv098.

Khairoutdinov, M., & Zhou, X. (2015, April). Changes in sub-daily precipitation extremes in a global climate model with super-parameterization under CO2 warming. In EGU General Assembly Conference Abstracts (Vol. 17, p. 7931).

Gribble, M. O., Karimi, R., Feingold, B. J., Nyland, J. F., O’Hara, T. M., Gladyshev, M. I., & Chen, C. Y. (2015). Mercury, selenium and fish oils in marine food webs and implications for human health. Journal of the Marine Biological Association of the United Kingdom, 1-17.

Zhou, X-H, D-P. Wang, and D. Chen, 2015b. Validating satellite altimeter measurements of internal tides with long-term TAO/TRITON buoy observations at 2oS-156oE. Geophy. Res. Lett., 42, doi:10.1002/2015GL063669.

Wang L; Han J, Zhu Y, Zhou R, Jaye C, Liu H, Li Z-Q, Taylor G, Fischer D, Appenzelle, J, Wong SS. 2015. Probing the dependence of electron transfer on size and coverage in carbon nanotube-quantum dot heterostructures. J Phys Chem 119: 26327–26338

Chao Ye, Weihua Qiao, Xiaobin Yu, Xiaojun Ji, He Huang, J. L. Collier, Liming Liu. 2015. Reconstruction and analysis of the genome-scale metabolic model ofschizochytrium limacinum SR21 for docosahexaenoic acid production. BMC Genomics 16 :799 (11pp). DOI 10.1186/s12864-015-2042-y

Mars Brisbin M, McElroy A, Pales Espinosa E, Allam B. 2015. Antimicrobial activity in the cuticle of the American lobster, Homarus americanus. Fish and Shellfish Immunology. 44: 542-546.

Lin, Yanluan Lin, Ming Zhao and Minghua Zhang, 2015: Tropical cyclone rainfall area controlled by relative sea surface temperature, Nature Communications 6, 6591m doi:10.1038/ncomms7591

Ridley, H.E., Y. Asmerom, J.U.L. Baldini, S.F.M. Breitenbach, V.V. Aquino, K.M. Prufer, Brendan J. Culleton, V. Polyak, F.A. Lechleitner, D.J. Kennett, M. Zhang, N. Marwan, C.G. Macpherson, L.M. Baldini, T. Xiao, J.L. Peterkin, J. Awe, G.H. Haug, 2015: Aerosol forcing of the position of the intertropical convergence zone since AD 1550. Nat. Geosci., 8 (2015)http://dx.doi.org/10.1038/ngeo2353

Zhang, M., 2015. Coupled Ocean-Atmosphere Models: Physical Processes. P144-152, In: Gerald R.North (editor-in-chief), John Pyle and Fuqing Zhang (editors). Encyclopedia of Atmospheric Sciences, 2nd edition, Vol 4, pp. 144–152. ISBN: 9780123822253, 2998pp, Copyright © 2015 Elsevier Ltd.

Walcker, R., E. J. Anthony, C. Cassou, R.C. Aller, A. Gardel, C. Proisy, J.-M. Martinez, and F. Fromard, 2015, Fluctuations in the extent of mangroves driven by multi-decadal changes in North Atlantic waves. J. Biogeogr., 42, 2209-2219.

A. J. Illingworth, H. W. Barker, A. Beljaars, M. Ceccaldi, H. Chepfer, N. Clerbaux, J. Cole, J. Delanoë, C. Domenech, D. P. Donovan, S. Fukuda, M. Hirakata, R. J. Hogan, A. Huenerbein, P. Kollias, T. Kubota, T. Nakajima, T. Y. Nakajima, T. Nishizawa, Y. Ohno, H. Okamoto, R. Oki, K. Sato, M. Satoh, M. W. Shephard, A. Velázquez-Blázquez, U. Wandinger, T. Wehr, and G.-J. van Zadelhoff, (2015), The EarthCARE Satellite: The Next Step Forward in Global Measurements of Clouds, Aerosols, Precipitation, and Radiation. Bull. Amer. Meteor. Soc., 96, 1311–1332. doi: http://dx.doi.org/10.1175/BAMS-D-12-00227.1

Robert Wood, Matthew Wyant, Christopher S. Bretherton, Jasmine Rémillard, Pavlos Kollias, Jennifer Fletcher, Jayson Stemmler, Simone de Szoeke, Sandra Yuter, Matthew Miller, David Mechem, George Tselioudis, J. Christine Chiu, Julian A. L. Mann, Ewan J. O’Connor, Robin J. Hogan, Xiquan Dong, Mark Miller, Virendra Ghate, Anne Jefferson, Qilong Min, Patrick Minnis, Rabindra Palikonda, Bruce Albrecht, Ed Luke, Cecile Hannay, and Yanluan Lin, (2015), Clouds, Aerosols, and Precipitation in the Marine Boundary Layer: An Arm Mobile Facility Deployment.Bull. Amer. Meteor. Soc., 96, 419–440. doi: http://dx.doi.org/10.1175/BAMS-D-13-00180.1

Chandra, A., Zhang, C., Kollias, P., Matrosov, S., and Szyrmer, W, (2015), Automated rain rate estimates using the Ka-band ARM zenith radar (KAZR), Atmos. Meas. Tech., 8, 3685-3699, doi:10.5194/amt-8-3685-2015.

Battaglia, A. and P. Kollias, (2015), Error Analysis of a Conceptual Cloud Doppler Stereoradar with Polarization Diversity for Better Understanding Space Applications. J. Atmos. Oceanic Technol., 32, 1298–1319. doi: http://dx.doi.org/10.1175/JTECH-D-14-00015.1

Maximilian Maahn, Ulrich Löhnert, Pavlos Kollias, Robert C. Jackson, and Greg M. McFarquhar, (2015), Developing and Evaluating Ice Cloud Parameterizations for Forward Modeling of Radar Moments Using in situ Aircraft Observations. J. Atmos. Oceanic Technol., 32, 880–903. doi: 10.1175/JTECH-D-14-00112.1

Gail Skofronick-Jackson, David Hudak, Walter Petersen, Stephen W. Nesbitt, V. Chandrasekar, Stephen Durden, Kirstin J. Gleicher, Gwo-Jong Huang, Paul Joe, Pavlos Kollias, Kimberly A. Reed, Mathew R. Schwaller, Ronald Stewart, Simone Tanelli, Ali Tokay, James R. Wang, and Mengistu Wolde, (2015), Global Precipitation Measurement Cold Season Precipitation Experiment (GCPEX): For Measurement’s Sake, Let It Snow. Bull. Amer. Meteor. Soc., 96, 1719–1741. doi: http://dx.doi.org/10.1175/BAMS-D-13-00262.1

Mechem, D. B., Giangrande, S. E., Wittman, C. S., Borque, P., Toto, T. and Kollias, P. (2015), Insights from modeling and observational evaluation of a precipitating continental cumulus event observed during the MC3E field campaign. J. Geophys. Res. Atmos., 120, 1980–1995. doi: 10.1002/2014JD022255.

Gledhill, D.K., M.M. White, J. Salisbury, H. Thomas, I. Mlsna, M. Liebman, B. Mook, J. Grear, A.C. Candelmo, R.C. Chambers, C.J. Gobler, C.W. Hunt, A.L. King, N.N. Price, S.R. Signorini, E. Stancioff, C. Stymiest, R.A. Wahle, J.D. Waller, N.D. Rebuck, Z.A. Wang, T.L. Capson, J.R. Morrison, S.R. Cooley, and S.C. Doney. (2015). Ocean and coastal acidification off New England and Nova Scotia. Oceanography 28(2), 182–197, http://dx.doi.org/10.5670/oceanog.2015.41

Feng, S., Li, Z., Liu, Y., Lin, W., Zhang, M., Toto, T., … & Endo, S. (2015). Development of fine‐resolution analyses and expanded large‐scale forcing properties: 2. Scale awareness and application to single‐column model experiments. Journal of Geophysical Research: Atmospheres.

Michael J McCann and Dianna K Padilla 2015. Effects of a patchy food environment across life history stages. Journal of Experimental Marine Biology and Ecology 472: 135-141.

Alexander Y. Karatayev, Demetrio Boltovskoy, Lyubov Burlakova and Dianna K. Padilla 2015. Parallels and contrasts between Limnoperna fortunei and species of Dreissena. In: Limnoperna fortunei: the ecology, distribution and control of a swiftly spreading invasive fouling mussel, Demetrio Boltovskoy, Editor. Springer.

Alexander Y. Karatayev, Lyubov E. Burlakova, Sergey E. Mastitsky, and Dianna K. Padilla 2015. Predicting the spread of aquatic invaders: insight from 200 years of invasion by zebra mussels. Ecological Applications 25: 430-440.

Alexander Y. Karatayev, Lyubov E. Burlakova and Dianna K. Padilla. 2015. Zebra versus quagga mussels: a review of their spread, population dynamics, and ecosystem impacts. Hydrobiologia 746: 97-112.

Chapman, D. D., Feldheim, K. A., Papastamatiou, Y. P., & Hueter, R. E. (2015). There and Back Again: A Review of Residency and Return Migrations in Sharks, with Implications for Population Structure and Management. Annual review of marine science, 7, 547-570.

Ashe, J. L., Feldheim, K. A., Fields, A. T., Reyier, E. A., Brooks, E. J., O’Connell, M. T., … & Chapman, D. D. (2015). Local population structure and context-dependent isolation by distance in a large coastal shark. Mar Ecol Prog Ser, 520, 203-216.

Watanabe, Y. Y., Goldman, K. J., Caselle, J. E., Chapman, D. D., & Papastamatiou, Y. P. (2015). Comparative analyses of animal-tracking data reveal ecological significance of endothermy in fishes. Proceedings of the National Academy of Sciences, 201500316.

Brooks, E. J., Brooks, A. M., Williams, S., Jordan, L. K., Abercrombie, D., Chapman, D. D., … & Grubbs, R. D. (2015). First description of deep-water elasmobranch assemblages in the Exuma Sound, The Bahamas. Deep Sea Research Part II: Topical Studies in Oceanography, 115, 81-91.

Fields, A. T., Feldheim, K. A., Poulakis, G. R., & Chapman, D. D. (2015). Facultative parthenogenesis in a critically endangered wild vertebrate. Current Biology, 25(11), R446-R447.

Tettelbach, S. T., B. J. Peterson, J. M. Carroll, B. T. Furman, S. W. T. Hughes, J. Havelin, J. R. Europe, D. M. Bonal, A. J. Weinstock and C. F. Smith. 2015. Aspiring to an Alternative Stable State: Rebuilding of Bay Scallop Populations and Fisheries Following Intensive Restoration. Marine Ecology Progress Series 529: 121-136.

Berry, D. L., J. A. Goleski, F. Koch, C. C. Wall, B. J. Peterson, O. R. Anderson and C. J. Gobler. 2015. Shifts in Cyanobacterial Strain Dominance during Onset of Harmful Algal Blooms in Florida Bay, USA. Molecular Ecology 70: 361-371.

Furman, B. T., L. J. Jackson, E. Bricker and B. J. Peterson. 2015. Sexual recruitment in Zostera marina: a patch to landscape-scale investigation. Limnology and Oceanography 60(2): 584-599.

Carroll, J. M., L. L. Jackson and B. J. Peterson. 2015. The effect of increasing habitat complexity on bay scallop survival in the presence of different decapod crustacean predators. Estuaries and Coasts 38: 1569-1579

Stubler, A. D., A. R. Duckworth and B. J. Peterson. 2015. Sedimentation affects sponge abundance, diversity and distribution on Jamaican coral reefs. Marine Pollution Bulletin 96: 261-270.

Stubler, A. D., B. T. Furman and B. J. Peterson. 2015. Sponge erosion under acidification and warming scenarios: differential impacts on living and dead coral. Global Change Biology 21(11): 4006-4020.

Furman, B. T. and B. J. Peterson. 2015. Sexual Recruitment in Zostera marina: Progress toward a Predictive Model. PLoS ONE 10(9): e0138206.

Trathan, P. N., P. García-Borboroglu, D. Boersma, C.-A. Bost, R. J. M. Crawford, G. T. Crossin, R. J. Cuthbert, P. Dann, L. S. Davis, S. De la Puente, U. Ellenberg, H.J. Lynch, T. Mattern, K. Pütz, P. J. Seddon, W. Trivelpiece, B. Wienecke. 2015. Assessing human impacts on marine systems, especially upon penguin species: how much do we care? Conservation Biology 29(1): 31-41.

Casanovas, P.V., R. Naveen, S. Forrest, J. Poncet, and H.J. Lynch. 2015. A comprehensive coastal seabird survey maps out the front lines of ecological change on the Western Antarctic Peninsula. Polar Biology 38: 927-940.

LaRue, M., G. Kooyman, H.J. Lynch, and P. Fretwell. 2015. Emigration in emperor penguins: Implications for interpretation of long-term studies. Ecography 38: 114-120.

Zhou, X., P. Kollias and E. Lewis, (2015), Clouds, Precipitation, and Marine Boundary Layer Structure during the MAGIC Field Campaign. J. Climate, 28, 2420–2442. doi: http://dx.doi.org/10.1175/JCLI-D-14-00320.1

Zermeno, D., C. Zhang, P. Kollias and H. Kalesse, (2015), Shallow Cloud Moistening in MJO and non-MJO Large-Scale Convective Events over the ARM Manus Site. J. Atmos. Sciences, doi: http://dx.doi.org/10.1175/JAS-D-14-0322.1

Lamer, K., P. Kollias, and L. Nuijens (2015), Observations of the variability of shallow trade wind cumulus cloudiness and mass flux. J. Geophys. Res. Atmos., 120, 6161–6178. doi: 10.1002/2014JD022950.

Marcus van Lier-Walqui, Ann Fridlind, Andrew Ackerman, Scott Collis, Jonathan Helmus, Donald MacGorman Kirk North, Pavlos Kollias and Derek Posselt, (2015), Polarimetric radar signatures of deep convection: characteristics of KDP columns observed during MC3E. Monthly Weather Review 2015; e-View doi: 10.1175/MWR-D-15-0100.1

Jiwen Fan, Yi-Chin Liu, Kuan-Man Xu, Kirk North, Scott Collis, Xiquan Dong, Guang J. Zhang, Qian Chen, Kollias Pavlos, and Steven J. Ghan, (2015), Improving Representation of Convective Transport for Scale-Aware Parameterization – Part I: Convection and Cloud Properties Simulated with Spectral-Bin and Bulk Microphysics. Accepted, Journal of Geophysical Research – Atmospheres

Kneifel, S., A.von Lerber, J. Tiira, D. Moisseev, P. Kollias, and J. Leinonen (2015), Observed relations between snowfall microphysics and triple-frequency radar measurements. J. Geophys. Res. Atmos., 120, 6034–6055. doi:10.1002/2015JD023156.

Jensen, M., et al., (2015), The Midlatitude Continental Convective Clouds Experiment (MC3E). Accepted to the Bulletin of the American Meteorological Society

Gownaris NJ, Pikitch EK, Ojwang WO, Michener R, Kaufman L (2015) Predicting Species’ Vulnerability in a Massively Perturbed System: The Fishes of Lake Turkana, Kenya. PLoS ONE 10(5): e0127027. doi:10.1371/journal.pone.0127027

Lin, W., Liu, Y., Vogelmann, A. M., Fridlind, A., Endo, S., Song, H., … & Zhang, M. (2015). RACORO Continental Boundary Layer Cloud Investigations. Part III: Separation of Parameterization Biases in Single‐Column Model CAM5 Simulations of Shallow Cumulus. Journal of Geophysical Research: Atmospheres.

Price, R. E., LaRowe, D. E., Italiano, F., Savov, I., Pichler, T., & Amend, J. P. (2015). Subsurface hydrothermal processes and the bioenergetics of chemolithoautotrophy at the shallow-sea vents off Panarea Island (Italy). Chemical Geology, 407, 21-45.

Engel, B.E; Hallock, P; Price, R.E.; and Pichler, T. (2015). Shell dissolution in larger benthic foraminifers exposed to pH and temperature extremes: Results from an in situ experiment. Journal of Foraminiferal Research. 45 (2).

Dasgupta, S., Huang, I.J., and McElroy A. E. 2015. Hypoxia enhances the toxicity of Corexit EC9500A and CEWAFs prepared with Louisiana Sweet Crude Oil (MD-242) to sheepshead minnow (Cyprinodon variegatus) larvae. PLoS One. DOI:10.1371/journal.pone.0128939.

Romany, J.S., McElroy A.E., and Fast, M. 2015. Measures of immune system status in young-of-the-year winter flounder (Pseudopleuronectes americanus) from Long Island coastal bays. J. Fish. Biol. 86:148-161.

K. Park*, L. K. Emmons, Z. Wang and J. E. Mak, Joint Application of Concentration and δ18O to Investigate the Global Atmospheric CO Budget, Atmosphere, 6, 547-578; doi:10.3390/atmos6050547, 2015.

K. Park*, Z. Wang, L. K. Emmons, J. E. Mak, Variation of atmospheric CO, δ13C and δ18O at high northern latitude during 2004-2009: observations and model simulations, J. Geophys.Res.-Atmos., 120, 11,024–11,036, doi:10.1002/2015JD023191, 2015.

P.K. Misztal et al., inc. J.E. Mak, Atmospheric benzenoid emissions from plants rival those from fossil fuel, Nature Sci. Rep., 5, 12064, 2015.

L. Su*, E. G. Patton, J. Vilà-Guerau de Arellano, A. B. Guenther, L. Kaser, B. Yuan, F. Xiong, P. B. Shepson, L. Zhang, D. O. Miller, W. H. Brune, K. Baumann, E. Edgerton, A. Weinheimer, and J. E. Mak, Understanding isoprene photo-oxidation using observations and modeling over a subtropical forest in the Southeast US, Atmos. Chem. Phys. Discuss., 15, 31621-31663, doi:10.5194/acpd-15-31621-2015, 2015.

Thalman, R., Baeza-Romero, M. T., Ball, S. M., Borrás, E., Daniels, M. J. S., Goodall, I. C. A., Henry, S. B., Karl, T., Keutsch, F. N., Kim, S., Mak, J., Monks, P. S., Muñoz, A., Orlando, J., Peppe, S., Rickard, A. R., Ródenas, M., Sánchez, P., Seco, R., Su, L., Tyndall, G., Vázquez, M., Vera, T., Waxman, E., and Volkamer, R.: Instrument intercomparison of glyoxal, methyl glyoxal and NO2 under simulated atmospheric conditions, Atmos. Meas. Tech., 8, 1835-1862, doi:10.5194/amt-8-1835-2015, 2015.

Yoo, C., S. Park, D. Kim, J. H. Yoon, and H. M. Kim, 2015: Boreal winter MJO teleconnection in the Community Atmosphere Model version 5 with the Unified Convection parameterization, J. Climate, 28, 8135-8150

Thorne, L. H., E. L. Hazen, S.J. Bograd, D.G. Foley, M.G. Conners, M.A. Kappes, H. M. Kim, Y. Tremblay, D.P. Costa, and S.A. Shaffer, 2015: Foraging behavior links climate variability and reproduction in North Pacific albatrosses, Movement Ecology, 3:27, DOI: 10.1186/s40462-015-0050-9

Yu, J. 2015 Erratum for “Approximations of the Dispersion Relationship of Water Waves” by J. Yu. J. Eng. Mech., 141(7) . doi: 10.1061/(ASCE)EM.1943-7889.0000941

Yu, J. and Chen, S. 2015 Hydrodynamic instability mechanism for rip currents. Studies in Applied Mathematics. 135: 196-223. doi: 10.1111/sapm.12074

Weidman, P., Herczynski, A., Yu, J. and Howard, L. N. 2015 Experiments on normal modes in a tank with corrugated bottom. J. Fluid Mech., 777: 122-150. doi:10.1017/jfm.2015.318

Carlisle AB, Goldman KJ, Litvin SY, Madigan DJ, Bigman JS, Swithenbank AM, Kline Jr TC & BA Block. 2015. Stable isotope analysis of salmon shark vertebrae reveals ontogenetic changes in habitat in a pelagic shark. Proceedings Royal Society B 282: 20141446.

Madigan DJ. 2015. Understanding bluefin migration using intrinsic tracers in tissues in T. Kitagawa & S. Kimura (Eds.), Biology & Ecology of Bluefin Tuna. Boca Raton, FL: CRC Press.

Carlisle AB, Litvin SY, Hazen EL, Madigan DJ, Goldman KJ, Lea RN & BA Block. 2015. Reconstructing habitat use by juvenile salmon sharks links upwelling to strandings in the California Current. Marine Ecology Progress Series 525: 217-228.

Lyons K, Preti A, Madigan DJ, Wells RJD, Blasius ME, Snodgrass OE, Kacev D, Harris JD, Dewar H, Kohin S, MacKenzie K & CG Lowe. 2015. Insights into the life history and ecology of a large shortfin mako shark (Isurus oxyrinchus) captured in southern California. Journal of Fish Biology. DOI:10.1111/jfb.12709.

Madigan DJ, Brooks EJ, Bond ME, Gelsleichter J, Howey LA, Abercrombie DL, Brooks A & DD Chapman. 2015. Diet shift and associated site-fidelity of oceanic whitetip sharks (Carcharhinus longimanus) along the edge of the Great Bahama Bank. Marine Ecology Progress Series 529: 185-197. DOI: 10.3354/meps11302.

Madigan DJ, Carlisle AB, Gardner LD, Jayasundara N, Micheli F, Schaefer KM, Fuller DW & BA Block. 2015. Assessing niche width of endothermic fish from genes to ecosystem. PNAS 112(27): 8350-8355.

Harris, C.M., K. Lorenz, L.D.C. Fishpool, B. Lascelles, J. Cooper, N. Coria, J.P. Croxall, L.M. Emmerson, R. Fijn, P. Jouventin, M.A. LaRue, Y. Le Maho, H.J. Lynch, R. Naveen, S. Poncet, R.A. Phillips, C.J. Southwell, J.A. van Franeker, H. Weimerskirch, B. Wienecke, and E.J. Woehler. 2015. Important Bird Areas in Antarctica Summary 2015. BirdLife International and Environmental Research & Assessment Ltd., Cambridge.

Rona, P., V. Guida, M.I. Scranton, D. Gong, L. Macelloni, M. Pierdomenico, A. Diercks, V. Asper, and S. Haag. 2015. Hudson submarine canyon head offshore New York and New Jersey: A physical and geochemical investigation of a fertile habitat space. Deep-Sea Research II, 121, 213-232. http://dx.doi.org/10.1016/j/dsr2.2015.07.019

Pierdomenico, M., V.G. Guida, L. Macelloni, F.L. Chiocci, P.A. Rona, M.I. Scranton, V. Asper and A. Diercks. 2015. Sedimentary facies, geomorphic features and habitat distribution at the Hudson Canyon head from AUV multibeam data. Deep-Sea Research II, 121, 112-125. http://dx.doi.org/10.1016/j.dsr2.2015.04.016.

Rodriguez-Mora, M, M.I. Scranton, G.T. Taylor, and A.Y. Chistoserdov. 2015. The dynamics of the bacterial diversity in the redox transition and anoxic zones of the Cariaco Basin assessed by parallel tag sequencing. FEMS Microbiology Ecology, 91(9), fiv088. doi:10.1093/femsec/fiv088.

Pershing, A. J., M. A. Alexander, C. M. Hernandez, L. A. Kerr, A. Le Bris, K. E. Mills, J. A. Nye, N. R. Record, H. A. Scannell, J. D. Scott, G. D. Sherwood, A. C. Thomas. (2015) Slow adaptation in the face of rapid warming leads to the collapse of an iconic fishery. Science 350 (6262): 809-812.

Tommasi, D., J.A. Nye, C. Stock, J. Hare, M. Alexander, K. Drew (2015) Effect of environmental conditions on river herring freshwater survival: a coastwide perspective. Canadian Journal of Fisheries and Aquatic Sciences 72(7): 1037-1047.

Levinton, J., Lord, S., Higeshide. 2015, Are crabs stressed for water on a hot sand flat? Water loss and field water state of two species of intertidal fiddler crabs. J. Exp. Mar. Biol. Ecol. 469: 57-62.

Sebastiano, D., Levinton, J., Doall, M., Kamath, S. 2015, Using a shellfish harvest strategy to extract high nitrogen inputs in coastal bays: Practical and economic implications. Journal of Shellfish Research, 34: 573-583.

Gillett, David, J., Stephan B. Weisberg, Treda Grayson, Anna Hamilton, Virginia Hansen, Erik W. Leppo, Marguerite C. Pelletier, Angel Borja, Donald Cadien, Daniel Dauer, Robert Diaz, Margaret Dutch, Jeffery L. Hyland, Michael Kellog, Peter Larsen, Jeffrey Levinton, Roberto Llansó, Lawrence L. Lovel, Paul Montagna, Dean Pasko, Charles A. Phillips, Chet Rakocinski, J. Ananda Ranasinghe, Denise M. Sanger, Heliana Teixeira, Robert F. Van Dolah, Ronald G. Velarde, and Kathy I. Welch. 2015, Effect of ecological group classification schemes on performance of the AMBI benthic index in US coastal waters Ecological Indicators, 50: 99-107.

Cahill, A. E. and Levinton, J. S. 2015, Genetic differentiation and reduced genetic diversity at the northern range edge of two species with different dispersal modes. Mol Ecol. Accepted Author Manuscript. doi:10.1111/mec.13497

Vogelmann, A. M., Fridlind, A. M., Toto, T., Endo, S., Lin, W., Wang, J., … Zhang, MH & Khairoutdinov, M. (2015). RACORO Continental Boundary Layer Cloud Investigations. Part I: Case Study Development and Ensemble Large‐Scale Forcings. Journal of Geophysical Research: Atmospheres.

Alfaro, D. A., & Khairoutdinov, M. (2015). Thermodynamic constraints on the morphology of simulated midlatitude squall lines. Journal of the Atmospheric Sciences, (2015).

Liu, P., Zhang, Q., Zhang, C., Zhu, Y., Khairoutdinov, M., Kim, H. M., … & Zhang, M. (2015). A Revised Real-Time Multivariate MJO Index. Monthly Weather Review, (2015).

Dheilly NM, Duval D, Mouahid G, Emans R, Allienne J-F, Genthon C, Dubois E, Du Pasquier L, Adema C, Grunau C, Mitta G, and Gourbal B. (2015). Diverse Immunoglobulin-like domain containing lectins in the snail Biomphalaria glabrata. Journal of Developmental and Comparative Immunology 48(1): 234-243

Dheilly NM, Maure F, Ravallec M, Galinier R, Doyon J, Duval D, Leger L, Volkoff A-N, Misse D, Nidelet S, Demolomb V, Brodeur J, Gourbal B, Thomas F, Mitta G. (2015). Who is the puppet master? Replication of a parasitic wasp-associated virus correlates with host behavior manipulation. Proceedings of the Royal Society B Biological Sciences 282(1803) http://rspb.royalsocietypublishing.org/content/282/1803/20142773

Harke, M. J., Davis, T. W., Watson, S. B., & Gobler, C. J. (2015). Nutrient-controlled niche differentiation of western Lake Erie cyanobacterial populations revealed via metatranscriptomic surveys. Environmental science & technology.

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Koch, F., Burson, A., Tang, Y. Z., Collier, J. L., Fisher, N. S., Sañudo-Wilhelmy, S., & Gobler, C. J. (2014). Alteration of plankton communities and biogeochemical cycles by harmful Cochlodinium polykrikoides (Dinophyceae) blooms. Harmful Algae, 33(0), 41-54. doi: http://dx.doi.org/10.1016/j.hal.2014.01.003

Souders, M. B., Colle, B. A., & Chang, E. K. 2014: The Climatology and Characteristics of Rossby Wave Packets Using a Feature-Based Tracking Technique. Monthly Weather Review, 142(10), 3528-3548.

Souders, M.B., B.A. Colle, and E.K.M. Chang, 2014: A description of an automated approach for feature-based tracking of Rossby wave packets. Mon. Wea. Rev., 142, 3505-3527, doi:10.1175/MWR-D-1300317.1.

Chang, E.K.M., 2014: Impacts of background field removal on CMIP5 projected changes in Pacific winter cyclone activity, J. Geophys. Res. Atmos., 119, 4626-4639, doi:10.1002/2013JD020746.

Xia, X.*, and E.K.M. Chang, 2014: Diabatic damping of zonal index variations, J. Atmos. Sci., 71, 3090-3105, doi:10.1175/JAS-D-13-0292.1.

Doherty, O. M., Riemer, N., & Hameed, S. (2014). Role of the convergence zone over West Africa in controlling Saharan mineral dust load and transport in the boreal summer. Tellus B, 66.

Wallace, R. B., Baumann, H., Grear, J. S., Aller, R. C., & Gobler, C. J. (2014). Coastal ocean acidification: The other eutrophication problem. Estuarine, Coastal and Shelf Science.

del Castillo C, Allam B. (2014). A comparative genomics analysis of the T3SS2α pathogenicity island of Vibrio parahaemolyticus. Journal of Shellfish Research 33(2): 550

Wang K, Pales Espinosa E, Allam B. (2014). Effect of “heat shock” treatments on QPX disease in the hard clam, Mercenaria mercenaria. Journal of Shellfish Research 33(2): 661.

Wang K, Del Castillo C, Pales Espinosa E, Allam B. (2014). Clam focal and systemic immune responses to QPX revealed by RNA-Seq technology. Journal of Shellfish Research 33(2): 661.

Rubin E, Pales Espinosa E, Koller A, Allam B. (2014). Extracellular proteins in quahog parasite unknown (QPX) mucoid secretion. Journal of Shellfish Research 33(2): 648.

Rubin E, Tanguy A, Pales Espinosa E, Allam B. (2014). Differential gene expression in quahog parasite unknown (QPX) in response to clam factors and transcriptomic profiling of five QPX isolates. Journal of Shellfish Research 33(2): 647-648.

Keeling PJ, Burki F, Wilcox HM, Allam B, Allen EE, et al. (2014). The Marine Microbial Eukaryote Transcriptome Sequencing Project (MMETSP): Illuminating the functional diversity of eukaryotic life in the oceans through transcriptome sequencing. PLoS Biology, 12(6), e1001889.

Rosa M, Ward E, Shumway S, Wikfors G, Pales Espinosa E, Allam B. (2014). Examining seasonal shifts in retention efficiency and mucosal composition in the blue mussel Mytilus edulis. Journal of Shellfish Research 33(2): 647.

Allam B., Corre E, Pales Espinosa E. (2014). Pallial mucus of Crassostrea virginica regulates the expression of putative virulence genes of its pathogen Perkinsus marinus. Journal of Shellfish Research 33(2): 586.

Allam, B., Pales Espinosa, E., Tanguy, A., Jeffroy, F., Le Bris, C., Paillard, C. 2014. Transcriptional changes in manila clam (Ruditapes philippinarum) in response to brown ring disease. Fish and Shellfish immunology. 41, 2-11.

Rubin E, Tanguy A, Perrigault M, Pales Espinosa E, Allam B. (2014). Characterization of the transcriptome and temperature-induced differential gene expression of in quahog parasite unknown QPX, the thraustochytrid parasite of hard clams. BMC Genomics 15: 245.

Pales Espinosa E, Koller T, Allam B. (2014). Shotgun proteomic characterization of the pallial mucus of the oyster Crassostrea virginica. Journal of Shellfish Research 33(2): 640.

Dahl S, Barnes D, Allam B. (2014). QPX disease relationships with environmental parameters monitored over a decade in a Raritan Bay (NY) hard clam fishery. Journal of Shellfish Research 33(2): 599-600.

Pales Espinosa E., Allam B. (2014). Food quality and season affect the expression of the mucosal lectin MeML and food sorting abilities in the blue mussel Mytilus edulis. Journal of Shellfish Research 33(2): 639-640.

Pales Espinosa E., Corre E, Allam B. (2014). Pallial mucus of Crassostrea virginica regulates the expression of putative virulence genes of its pathogen Perkinsus marinus. International Journal for Parasitology 44: 305-317.

Beaupré, S. R. (2014). Chapter 6: The isotopic composition of marine DOC, in Biogeochemistry of Marine Dissolved Organic Carbon, 2nd Edition, edited by D. A. Hansell and C. A. Carlson, pp. 335-368, Academic Press, U.K.

Geers, T.M., E.K. Pikitch, M.G. Frisk (In Press-online February 5, 2014). An Original Model of the Northern Gulf of Mexico using Ecopath with Ecosim and its Implications for the Effects of Fishing on Ecosystem Structure and Maturity. Deep Sea Research Part II: Topical Studies in Oceanography.

Berg, L. K., J. D. Fast, J. C. Barnard, S. P. Burton, B. Cairns, D. Chand, J. M. Comstock, S. Dunagan, R. A. Ferrare, C. J. Flynn, J. W. Hair., C. A. Hostetler., J. Hubbe., R. Johnson, E. I. Kassianov, C. D. Kluzek, P. Kollias, K. Lamer, F. Mei, M. A. Miller, J. Michalsky, I. Ortega, R R. Rogers., P. B. Russell, J. Redemann, A. J. Sedlacek III, M. Segal-Rosenheimer, B. Schmid, J. E. Shilling, Y. Shinozuka, S. R. Springston, J. Tomlinson, M. Tyrrell, J. M. Wilson, R. Volkamer, A. Zelenyuk, and C. M. Berkowitz, (2013), The Two-Column Aerosol Project: Phase I Overview and Impact of Elevated Aerosol Layers on Aerosol Optical Depth, Accepted to the Journal of Geophysical Research

Taylor, D. (2013). The Log from the Sea of Cortez: A Poem Series. San Antonio, TX: Wings Press.

Taylor, D. (2013). The Log from the Sea of Cortez: A Poem Series. San Antonio, TX: Wings Press.

Archer, C. L., Colle, B. C., Monache, L., Dvorak, M. J., Lundquist, J., Bailey, B. H., … & Zack, J. 2013: Meteorology for coastal/offshore wind energy in the United States: recommendations and research needs for the next 10 years. Bulletin of the American Meteorological Society.

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Safina, C. 2011. A Sea in Flames. Random House, Inc. New York.

Safina, C. 2011. The View From Lazy Point. Henry Holt Co. New York.

Safina, C. 2011. The View From Lazy Point. Henry Holt Co. New York.

Safina, C. 2010. Nina Delmar and the Great Whale Rescue (Illustr. children’s book).

Safina, C. 2010. Nina Delmar and the Great Whale Rescue (Illustr. children’s book).

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Camhi, M. D., E. K. Pikitch and E. A. Babcock, editors. 2008. Sharks of the Open Ocean: Biology, Fisheries and Conservation. Blackwell Publishing, Oxford, UK. 536 p.

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Taylor, D. (2006). Pride of Place: A Contemporary Anthology of Texas Nature Writing. University of North Texas Press.

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Safina, C. 1998. Song For The Blue Ocean. Henry Holt Co. New York.

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2016 Publications

by | Jan 1, 2016

Allam, Bassem Liu, Q., Collier, J. L., & Allam, B. (2016). Seasonality of QPX disease in the Raritan Bay (NY) wild hard clam (Mercenaria mercenaria) population. Aquaculture Research. Aller, Josie Aller, Robert Beaupré, Steven Soulet, G., Skinner, L. C., Beaupré,...

2015 Publications

by | Jan 5, 2015

Allam, Bassem Wang, K., Espinosa, E. P., Tanguy, A., & Allam, B. (2015). Alterations of the immune transcriptome in resistant and susceptible hard clams (Mercenaria mercenaria) in response to Quahog Parasite Unknown (QPX) and temperature. Fish & Shellfish...

2014 Publications

by | Jan 10, 2014

Allam, Bassem Rubin, E., Espinosa, E. P., Koller, A., & Allam, B. (2014). Characterization of the secretome of the clam parasite, QPX. International Journal for Parasitology. Raghuvanshi, D. S., Kumari, K., Allam, B. K., & Singh, K. N. (2014). A convenient and...

2013 Publications

by | Jan 10, 2013

Allam, Bassem Allam B. , Carden WE, Ward JE, Ralph G, Winnicki S, Pales Espinosa E. (2013). Early host-pathogen interactions in marine bivalves: Evidence that the alveolate parasite Perkinsus marinus infects through the oyster mantle during rejection of pseudofeces....

2012 Publications

by | Jan 10, 2012

Allam, Bassem Allam B. 2012. Development of strategies to mitigate QPX disease in the hard clam Mercenaria mercenaria. Journal of Shellfish Research 31(1): 207-207. Sokolowski, M.S., B.A. Allam, K.J. Dunton, M.A. Clark, E.B. Kurtz and M.D.Fast. 2012. Immunophysiology...

2011 Publications

by | Jan 10, 2011

Allam, Bassem Rosa, M.E., J.E. Ward, S.E. Shumway, G.H. Wikfors, B.A. Holohan, E. Pales-Espinosa and B. Allam. 2011. The role of particle surface properties on feeding selectivity by Eastern oysters, Crassostrea virginica, and blue mussels, Mytilus edulis. Journal of...

2010 Publications

by | Jan 10, 2010

Allam, Bassem Pales Espinosa, E., M. Perrigault and B. Allam. 2010. Identification and molecular characterization of a mucosal lectin (MeML) from Mytilus edulis and its potential role in particle capture. Comparative Biochemistry and Physiology 156: 495-501....

2009 Publications

by | Jan 10, 2009

Allam, Bassem Perrigault M., A. Tanguy and B. Allam. 2009. Indentification and quantification of differentially expressed genes in the hard clam, Mercenaria mercenaria, in response to quahog parasite unknown (QPX). BMC Genomics 10: 377. doi:10.1186/1471-2164-10-377...

School of Marine and Atmospheric Sciences, SoMAS, at Stony Brook University, Stony Brook, NY 11794-5000, USA
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