Ramblings of a Bayesian (Part I)

“There are three kinds of lies: lies, damned lies and statistics.”  In this first article, I will try to explain the concepts of what we now call probability. You may have heard probabilities used in different contexts; here are three common examples: 1. There is a 30% chance of rain in Stony Brook, NY, tomorrow, […]

Hello world!

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Adventures with Beaglebone Green Wireless

I wanted to share some experiences with the Beaglebone Green Wireless that I received a few weeks ago.  This board seems ideal for IoT applications but since it is pretty new and since not many people own it yet, there is not much support out there. Let me first say that I really love how […]

Open Hardware Microfluidics Controller Arduino Shield

Finally, I managed to produce our first open hardware project.  The Microfluidics Controller allows us to drive 8 air pressure controllers and 8 air valves.  For this we have two 4-channel Digital-to-Analog chips (MCP4728) that produce voltages from 0-5V as input for our air-pressure controllers.  The air switching valves are driven using a darlington array […]

Gelman bioassay without MCMC

I am currently teaching a class on Advanced Numerical Methods in Biomedical Engineering (BME 502) at Stony Brook University and I wanted to include some basic Bayesian Analysis.  I chose to go through some of the examples in “Bayesian Data Analysis” by A. Gelman, J.B. Carlin, H.S. Stern, D.B. Dunson, A.Vehtari and D.B. Rubin.  Since […]

Mathjax in Squarespace 6

Finally, I managed to get Mathjax working in Squarespace 6.  This is how it works: 1. Under Settings -> Code injection insert the following in the header: <script type=”text/javascript” src=”http://cdn.mathjax.org/mathjax/latest/MathJax.js?config=TeX-AMS-MML_HTMLorMML”></script> then insert the following in a code block as HTML and you will see the Mathjax rendered equation below: When \(a \ne 0\), there are […]